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Interaction networks

Proteomic analysis reveals novel ligands and substrates for LNX1 E3 ubiquitin ligase

Joan A. Lenihan, Orthis Saha, Paul W. Young

published 09 Nov 2017

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Ensemble-based modeling and rigidity decomposition of allosteric interaction networks and communication pathways in cyclin-dependent kinases: Differentiating kinase clients of the Hsp90-Cdc37 chaperone

Gabrielle Stetz, Amanda Tse, Gennady M. Verkhivker

published 02 Nov 2017

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Transition to reconstructibility in weakly coupled networks

Benedict J. Lünsmann, Christoph Kirst, Marc Timme

published 20 Oct 2017

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PICKLE 2.0: A human protein-protein interaction meta-database employing data integration via genetic information ontology

Aris Gioutlakis, Maria I. Klapa, Nicholas K. Moschonas

published 12 Oct 2017

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A novel network analysis approach reveals DNA damage, oxidative stress and calcium/cAMP homeostasis-associated biomarkers in frontotemporal dementia

Fernando Palluzzi, Raffaele Ferrari, Francesca Graziano, Valeria Novelli, Giacomina Rossi, Daniela Galimberti, Innocenzo Rainero, Luisa Benussi, Benedetta Nacmias, Amalia C. Bruni, Daniele Cusi, Erika Salvi, Barbara Borroni, Mario Grassi

published 11 Oct 2017

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HTS-Net: An integrated regulome-interactome approach for establishing network regulation models in high-throughput screenings

Claire Rioualen, Quentin Da Costa, Bernard Chetrit, Emmanuelle Charafe-Jauffret, Christophe Ginestier, Ghislain Bidaut

published 26 Sep 2017

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Identifying species at coextinction risk when detection is imperfect: Model evaluation and case study

Michaela Plein, William K. Morris, Melinda L. Moir, Peter A. Vesk

published 28 Aug 2017

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Docking-based modeling of protein-protein interfaces for extensive structural and functional characterization of missense mutations

Didier Barradas-Bautista, Juan Fernández-Recio

published 25 Aug 2017

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Cutaneous transcriptome analysis in NIH hairless mice

Zhong-Hao Ji, Jian Chen, Wei Gao, Jin-Yu Zhang, Fu-Shi Quan, Jin-Ping Hu, Bao Yuan, Wen-Zhi Ren

published 07 Aug 2017

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Inferring microbial interactions in thermophilic and mesophilic anaerobic digestion of hog waste

Grace Tzun-Wen Shaw, An-Chi Liu, Chieh-Yin Weng, Chu-Yang Chou, Daryi Wang

published 21 Jul 2017

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The collαgen III fibril has a “flexi-rod” structure of flexible sequences interspersed with rigid bioactive domains including two with hemostatic roles

J. Des Parkin, James D. San Antonio, Anton V. Persikov, Hayat Dagher, Raymond Dalgleish, Shane T. Jensen, Xavier Jeunemaitre, Judy Savige

published 13 Jul 2017

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Proteome profiling in IL-1β and VEGF-activated human umbilical vein endothelial cells delineates the interlink between inflammation and angiogenesis

Thomas Mohr, Verena Haudek-Prinz, Astrid Slany, Johannes Grillari, Michael Micksche, Christopher Gerner

published 15 Jun 2017

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Network based stratification of major cancers by integrating somatic mutation and gene expression data

Zongzhen He, Junying Zhang, Xiguo Yuan, Zhaowen Liu, Baobao Liu, Shouheng Tuo, Yajun Liu

published 16 May 2017

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