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Hydrogen bonding

Designing of Highly Effective Complementary and Mismatch siRNAs for Silencing a Gene

Firoz Ahmed, Gajendra P. S. Raghava

published 10 Aug 2011

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Specificity of RSG-1.2 Peptide Binding to RRE-IIB RNA Element of HIV-1 over Rev Peptide Is Mainly Enthalpic in Origin

Santosh Kumar, Debojit Bose, Hemant Suryawanshi, Harshana Sabharwal, Koyeli Mapa, Souvik Maiti

published 10 Aug 2011

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Prediction of Ligand Binding Using an Approach Designed to Accommodate Diversity in Protein-Ligand Interactions

Lorraine Marsh

published 10 Aug 2011

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A Single Amino Acid of Human Immunodeficiency Virus Type 2 Capsid Protein Affects Conformation of Two External Loops and Viral Sensitivity to TRIM5α

Tadashi Miyamoto, Masaru Yokoyama, Ken Kono, Tatsuo Shioda, Hironori Sato, Emi E. Nakayama

published 28 Jul 2011

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X-Ray Structure Reveals a New Class and Provides Insight into Evolution of Alkaline Phosphatases

Subhash C. Bihani, Amit Das, Kayzad S. Nilgiriwala, Vishal Prashar, Michel Pirocchi, Shree Kumar Apte, Jean-Luc Ferrer, Madhusoodan V. Hosur

published 28 Jul 2011

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Characterization of the Channel Constriction Allowing the Access of the Substrate to the Active Site of Yeast Oxidosqualene Cyclase

Simonetta Oliaro-Bosso, Giulia Caron, Silvia Taramino, Giuseppe Ermondi, Franca Viola, Gianni Balliano

published 21 Jul 2011

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Structure of the Full-Length Major Pilin from Streptococcus pneumoniae: Implications for Isopeptide Bond Formation in Gram-Positive Bacterial Pili

Neil G. Paterson, Edward N. Baker

published 08 Jul 2011

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A Coarse-Grained Approach to Protein Design: Learning from Design to Understand Folding

Ivan Coluzza

published 01 Jul 2011

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Crystal Structures of Histone and p53 Methyltransferase SmyD2 Reveal a Conformational Flexibility of the Autoinhibitory C-Terminal Domain

Yuanyuan Jiang, Nualpun Sirinupong, Joseph Brunzelle, Zhe Yang

published 28 Jun 2011

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Identification of the Allosteric Regulatory Site of Insulysin

Nicholas Noinaj, Sonia K. Bhasin, Eun Suk Song, Kirsten E. Scoggin, Maria A. Juliano, Luiz Juliano, Louis B. Hersh, David W. Rodgers

published 24 Jun 2011

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Detailed Regulatory Mechanism of the Interaction between ZO-1 PDZ2 and Connexin43 Revealed by MD Simulations

Fei Xiao, Jingwei Weng, Kangnian Fan, Wenning Wang

published 23 Jun 2011

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Recognition of 5-Hydroxymethylcytosine by the Uhrf1 SRA Domain

Carina Frauer, Thomas Hoffmann, Sebastian Bultmann, Valentina Casa, M. Cristina Cardoso, Iris Antes, Heinrich Leonhardt

published 22 Jun 2011

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Hydrogen Bonding Penalty upon Ligand Binding

Hongtao Zhao, Danzhi Huang

published 17 Jun 2011

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