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Genetic elements

Dissemination of carbapenemase-producing Enterobacterales in the community of Rawalpindi, Pakistan

Amina Habib, Stéphane Lo, Khanh Villageois-Tran, Marie Petitjean, Shaheen Akhtar Malik, Laurence Armand-Lefèvre, Etienne Ruppé, Rabaab Zahra

published 08 Jul 2022

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Transfer dynamics of multi-resistance plasmids in Escherichia coli isolated from meat

Tania S. Darphorn, Belinda B. Koenders-van Sintanneland, Anita E. Grootemaat, Nicole N. van der Wel, Stanley Brul, Benno H. ter Kuile

published 07 Jul 2022

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Identification and functional characterization of the German cockroach, Blattella germanica, short interspersed nuclear elements

Sergei Yu. Firsov, Karina A. Kosherova, Dmitry V. Mukha

published 13 Jun 2022

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Virulome and genome analyses identify associations between antimicrobial resistance genes and virulence factors in highly drug-resistant Escherichia coli isolated from veal calves

Bradd J. Haley, Seon Woo Kim, Serajus Salaheen, Ernest Hovingh, Jo Ann S. Van Kessel

published 17 Mar 2022

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Healthcare-associated infections caused by chlorhexidine-tolerant Serratia marcescens carrying a promiscuous IncHI2 multi-drug resistance plasmid in a veterinary hospital

Joanne L. Allen, Nicholas P. Doidge, Rhys N. Bushell, Glenn F. Browning, Marc S. Marenda

published 17 Mar 2022

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Pan-genome and resistome analysis of extended-spectrum ß-lactamase-producing Escherichia coli: A multi-setting epidemiological surveillance study from Malaysia

Jacky Dwiyanto, Jia Wei Hor, Daniel Reidpath, Tin Tin Su, Shaun Wen Huey Lee, Qasim Ayub, Faizah Binti Mustapha, Sui Mae Lee, Su Chern Foo, Chun Wie Chong, Sadequr Rahman

published 10 Mar 2022

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A large accessory genome and high recombination rates may influence global distribution and broad host range of the fungal plant pathogen Claviceps purpurea

Stephen Wyka, Stephen Mondo, Miao Liu, Vamsi Nalam, Kirk Broders

published 10 Feb 2022

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Identification of genes involved in exoprotein release using a high-throughput exoproteome screening assay in Yersinia entomophaga

Marion Schoof, Maureen O’Callaghan, Campbell R. Sheen, Travis R. Glare, Mark R. H. Hurst

published 25 Jan 2022

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Whole genome sequencing and characteristics of Escherichia coli with co-existence of ESBL and mcr genes from pigs

Suthathip Trongjit, Rungtip Chuanchuen

published 16 Nov 2021

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CicerSpTEdb: A web-based database for high-resolution genome-wide identification of transposable elements in Cicer species

Morad M. Mokhtar, Alsamman M. Alsamman, Haytham M. Abd-Elhalim, Achraf El Allali

published 11 Nov 2021

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Detection of structural variations in densely-labelled optical DNA barcodes: A hidden Markov model approach

Albertas Dvirnas, Callum Stewart, Vilhelm Müller, Santosh Kumar Bikkarolla, Karolin Frykholm, Linus Sandegren, Erik Kristiansson, Fredrik Westerlund, Tobias Ambjörnsson

published 05 Nov 2021

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Differential expression of transposable elements in the medaka melanoma model

Frederik Helmprobst, Susanne Kneitz, Barbara Klotz, Magali Naville, Corentin Dechaud, Jean-Nicolas Volff, Manfred Schartl

published 27 Oct 2021

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A Genomic Survey of Mayetiola destructor Mobilome Provides New Insights into the Evolutionary History of Transposable Elements in the Cecidomyiid Midges

Wiem Ben Amara, Hadi Quesneville, Maha Mezghani Khemakhem

published 11 Oct 2021

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