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Genetic elements

Saturated Transposon Analysis in Yeast as a one-step method to quantify the fitness effects of gene disruptions on a genome-wide scale

Enzo Kingma, Floor Dolsma, Leila Iñigo de la Cruz, Liedewij Laan

published 06 Feb 2025

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A CACTA-like transposon in the Anthocyanidin synthase 1 (Ans-1) gene is responsible for apricot fruit colour in the raspberry (Rubus idaeus) cultivar ‘Varnes’

Daniel James Sargent, Matteo Buti, Stefan Martens, Claudio Pugliesi, Kjersti Aaby, Dag Røen, Chandra Bhan Yadav, Felicidad Fernández Fernández, Muath Alsheikh, Jahn Davik, R. Jordan Price

published 03 Feb 2025

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An insight into the genome-wide analysis of bacterial defense mechanisms in a uropathogenic Morganella morganii isolate from Bangladesh

Syed Muktadir Al Sium, Barna Goswami, Sanjana Fatema Chowdhury, Showti Raheel Naser, Mihir Kanti Sarkar, Md. Jobaid Faruq, Md. Ahashan Habib, Shahina Akter, Tanjina Akhtar Banu, Md. Murshed Hasan Sarkar, Md. Salim Khan

published 23 Jan 2025

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Plasmidome of Salmonella enterica serovar Infantis recovered from surface waters in a major agricultural region for leafy greens in California

Beatriz Quiñones, Bertram G. Lee, Ashley Avilés Noriega, Lisa Gorski

published 30 Dec 2024

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Canine uropathogenic and avian pathogenic Escherichia coli harboring conjugative plasmids exhibit augmented growth and exopolysaccharide production in response to Enterococcus faecalis

Grayson K. Walker, M. Mitsu Suyemoto, Megan E. Jacob, Siddhartha Thakur, Luke B. Borst

published 27 Nov 2024

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Taking advantage of reference-guided assembly in a slowly-evolving lineage: Application to Testudo graeca

Andrea Mira-Jover, Eva Graciá, Andrés Giménez, Uwe Fritz, Roberto Carlos Rodríguez-Caro, Yann Bourgeois

published 09 Aug 2024

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Comparative genomics of Tn6411 transposons carrying the bla_IMP-1 gene in Pseudomonas aeruginosa

Lin Zheng, Zixian Wang, Jingyi Guo, Jiayao Guan, Gejin Lu, Jie Jing, Shiwen Sun, Yang Sun, Xue Ji, Bowen Jiang, Yongjie Wang, Chuanfang Zhao, Lingwei Zhu, Xuejun Guo

published 09 Jul 2024

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A cell competition system with one gene expression from a single-copy gene in one cell

Yoshinori Hasegawa, Megumi Nakano, Tsutomu Hosouchi, Takashi Watanabe, Izumi Yamaguchi, Manabu Nakayama, Osamu Ohara

published 05 Jul 2024

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Influence of selected non-antibiotic pharmaceuticals on antibiotic resistance gene transfer in Escherichia coli

Doaa Safwat Mohamed, Rehab Mahmoud Abd El-Baky, Mohamed Ahmed El-Mokhtar, Sahar K. Ghanem, Ramadan Yahia, Alaa M. Alqahtani, Mohammed A. S. Abourehab, Eman Farouk Ahmed

published 21 Jun 2024

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A novel replication initiation region encoded in a widespread Acinetobacter plasmid lineage carrying a blaNDM-1 gene

Elena Bello-López, Ángeles Pérez-Oseguera, Walter Santos, Miguel Ángel Cevallos

published 31 May 2024

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Genomic analysis of multidrug-resistant Escherichia coli from Urban Environmental water sources in Accra, Ghana, Provides Insights into public health implications

Rebecca Tettey, Beverly Egyir, Prudence Tettey, John Arko-Mensah, Samuel Ofori Addo, Christian Owusu-Nyantakyi, William Boateng, Julius Fobil

published 24 May 2024

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Geographical distribution of mobile genetic elements in microbial communities along the Yucatan coast

Francisco Guillén-Chable, Johnny Omar Valdez Iuit, Luis Alejandro Avila Castro, Carlos Rosas, Enrique Merino, Zuemy Rodríguez-Escamilla, Mario Alberto Martínez-Núñez

published 29 Apr 2024

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New insights on mcr-1-harboring plasmids from human clinical Escherichia coli isolates

Florencia Martino, Alejandro Petroni, María Alejandra Menocal, Alejandra Corso, Roberto Melano, Diego Faccone

published 26 Feb 2024

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