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Gene sequencing

Fine mapping and candidate gene analysis of qTAC8, a major quantitative trait locus controlling tiller angle in rice (Oryza sativa L.)

Jiwai He, Gaoneng Shao, Xiangjin Wei, Fenglin Huang, Zhonghua Sheng, Shaoqing Tang, Peisong Hu

published 25 May 2017

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16S rRNA gene sequencing and healthy reference ranges for 28 clinically relevant microbial taxa from the human gut microbiome

Daniel E. Almonacid, Laurens Kraal, Francisco J. Ossandon, Yelena V. Budovskaya, Juan Pablo Cardenas, Elisabeth M. Bik, Audrey D. Goddard, Jessica Richman, Zachary S. Apte

published 03 May 2017

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Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform

Chongqing Wen, Liyou Wu, Yujia Qin, Joy D. Van Nostrand, Daliang Ning, Bo Sun, Kai Xue, Feifei Liu, Ye Deng, Yuting Liang, Jizhong Zhou

published 28 Apr 2017

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Multiple components of PKA and TGF-β pathways are mutated in pseudomyxoma peritonei

Lilli Saarinen, Pirjo Nummela, Alexandra Thiel, Rainer Lehtonen, Petrus Järvinen, Heikki Järvinen, Lauri A. Aaltonen, Anna Lepistö, Sampsa Hautaniemi, Ari Ristimäki

published 20 Apr 2017

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The cobas^® HCV GT is a new tool that accurately identifies Hepatitis C virus genotypes for clinical practice

J. A. Fernández-Caballero, M. Alvarez, N. Chueca, A. B. Pérez, F. García

published 14 Apr 2017

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Mobile Genome Express (MGE): A comprehensive automatic genetic analyses pipeline with a mobile device

Jun-Hee Yoon, Thomas W. Kim, Pedro Mendez, David M. Jablons, Il-Jin Kim

published 12 Apr 2017

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Targeted high throughput sequencing in hereditary ataxia and spastic paraplegia

Zafar Iqbal, Siri L. Rydning, Iselin M. Wedding, Jeanette Koht, Lasse Pihlstrøm, Aina H. Rengmark, Sandra P. Henriksen, Chantal M. E. Tallaksen, Mathias Toft

published 31 Mar 2017

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Improvement of identification methods for honeybee specific Lactic Acid Bacteria; future approaches

Sepideh Lamei, Yue O. O. Hu, Tobias C. Olofsson, Anders F. Andersson, Eva Forsgren, Alejandra Vásquez

published 27 Mar 2017

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Longitudinal sampling of the lung microbiota in individuals with cystic fibrosis

Fiona J. Whelan, Alya A. Heirali, Laura Rossi, Harvey R. Rabin, Michael D. Parkins, Michael G. Surette

published 02 Mar 2017

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GLM-based optimization of NGS data analysis: A case study of Roche 454, Ion Torrent PGM and Illumina NextSeq sequencing data

Sarah Sandmann, Aniek O. de Graaf, Bert A. van der Reijden, Joop H. Jansen, Martin Dugas

published 21 Feb 2017

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Exome sequencing covers >98% of mutations identified on targeted next generation sequencing panels

Holly LaDuca, Kelly D. Farwell, Huy Vuong, Hsiao-Mei Lu, Wenbo Mu, Layla Shahmirzadi, Sha Tang, Jefferey Chen, Shruti Bhide, Elizabeth C. Chao

published 02 Feb 2017

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Application of Stochastic Labeling with Random-Sequence Barcodes for Simultaneous Quantification and Sequencing of Environmental 16S rRNA Genes

Tatsuhiko Hoshino, Fumio Inagaki

published 04 Jan 2017

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A Single-Granule-Level Approach Reveals Ecological Heterogeneity in an Upflow Anaerobic Sludge Blanket Reactor

Kyohei Kuroda, Masaru K. Nobu, Ran Mei, Takashi Narihiro, Benjamin T. W. Bocher, Takashi Yamaguchi, Wen-Tso Liu

published 09 Dec 2016

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