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Gene sequencing

Assessment of the clinical utility of four NGS panels in myeloid malignancies. Suggestions for NGS panel choice or design

Almudena Aguilera-Diaz, Iria Vazquez, Beñat Ariceta, Amagoia Mañú, Zuriñe Blasco-Iturri, Sara Palomino-Echeverría, María José Larrayoz, Ramón García-Sanz, María Isabel Prieto-Conde, María del Carmen Chillón, Ana Alfonso-Pierola, Felipe Prosper, Marta Fernandez-Mercado, María José Calasanz

published 24 Jan 2020

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Comparing bioinformatic pipelines for microbial 16S rRNA amplicon sequencing

Andrei Prodan, Valentina Tremaroli, Harald Brolin, Aeilko H. Zwinderman, Max Nieuwdorp, Evgeni Levin

published 16 Jan 2020

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Diversity of Mycobacteriaceae from aquatic environment at the São Paulo Zoological Park Foundation in Brazil

Camila Lopes Romagnoli, Katia Cristina Machado Pellegrino, Natalia Maria Silva, Urze Adomaitis Brianesi, Sylvia Cardoso Leão, Michelle Christiane da Silva Rabello, Cristina Viana-Niero

published 14 Jan 2020

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Effect of endometriosis on the fecal bacteriota composition of mice during the acute phase of lesion formation

Josefine Hantschel, Severin Weis, Karl-Herbert Schäfer, Michael D. Menger, Matthias Kohl, Markus Egert, Matthias W. Laschke

published 30 Dec 2019

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DNA metabarcoding-based diet survey for the Eurasian otter (Lutra lutra): Development of a Eurasian otter-specific blocking oligonucleotide for 12S rRNA gene sequencing for vertebrates

Priyanka Kumari, Ke Dong, Kyung Yeon Eo, Woo-Shin Lee, Junpei Kimura, Naomichi Yamamoto

published 12 Dec 2019

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Autosomal-dominant hypotrichosis with woolly hair: Novel gene locus on chromosome 4q35.1-q35.2

Annika E. Schlaweck, Rachid Tazi-Ahnini, F. Buket Ü. Basmanav, Javed Mohungoo, Sandra M. Pasternack-Ziach, Manuel Mattheisen, Ana-Maria Oprisoreanu, Aytaj Humbatova, Sabrina Wolf, Andrew Messenger, Regina C. Betz

published 02 Dec 2019

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Molecular characterisation of the synovial fluid microbiome in rheumatoid arthritis patients and healthy control subjects

Dargham Bayan Mohsen Hammad, Veranja Liyanapathirana, Daniel Paul Tonge

published 21 Nov 2019

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New Mycobacteroides abscessus subsp. massiliense strains with recombinant hsp65 gene laterally transferred from Mycobacteroides abscessus subsp. abscessus: Potential for misidentification of M. abscessus strains with the hsp65-based method

Byoung-Jun Kim, Ga-Na Kim, Bo-Ram Kim, Tae-Sun Shim, Yoon-Hoh Kook, Bum-Joon Kim

published 13 Sep 2019

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Effects of road salt on microbial communities: Halophiles as biomarkers of road salt pollution

Wolf T. Pecher, M. Emad Al Madadha, Priya DasSarma, Folasade Ekulona, Eric J. Schott, Kelli Crowe, Bojana Stojkovic Gut, Shiladitya DasSarma

published 04 Sep 2019

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Analysis of the 56-kDa type specific antigen gene of Orientia tsutsugamushi from northern Vietnam

Nguyen Vu Trung, Le Thi Hoi, Do Duy Cuong, Doan The Ha, Tran Mai Hoa, Vu Ngoc Lien, Nguyen Thi Hoa, Le Nguyen Minh Hoa, Dang Thi Huong, Vu Thi Ngoc Bich, H. Rogier van Doorn, Behzad Nadjm, Allen L. Richards

published 30 Aug 2019

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A research-based gene panel to investigate breast, ovarian and prostate cancer genetic risk

Madison R. Bishop, Anna L. W. Huskey, John Hetzel, Nancy D. Merner

published 15 Aug 2019

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Hybrid gene misregulation in multiple developing tissues within a recent adaptive radiation of Cyprinodon pupfishes

Joseph A. McGirr, Christopher H. Martin

published 10 Jul 2019

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Utility of platforms Viteks MS and Microflex LT for the identification of complex clinical isolates that require molecular methods for their taxonomic classification

María Florencia Rocca, Rubén Barrios, Jonathan Zintgraff, Claudia Martínez, Lucía Irazu, Carlos Vay, Mónica Prieto

published 03 Jul 2019

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