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Gene sequencing

PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets

Ameet J. Pinto, Lutgarde Raskin

A Versatile Medium for Cultivating Methanogenic Archaea

Saber Khelaifia, Didier Raoult, Michel Drancourt

A Filtering Method to Generate High Quality Short Reads Using Illumina Paired-End Technology

A. Murat Eren, Joseph H. Vineis, Hilary G. Morrison, Mitchell L. Sogin

Analysis of 16S rRNA Amplicon Sequencing Options on the Roche/454 Next-Generation Titanium Sequencing Platform

Hideyuki Tamaki, Chris L. Wright, [ ... ], Wen-Tso Liu

Assessing the Effect of Sequencing Depth and Sample Size in Population Genetics Inferences

Matteo Fumagalli

Soil Bacterial Diversity Screening Using Single 16S rRNA Gene V Regions Coupled with Multi-Million Read Generating Sequencing Technologies

Sotirios Vasileiadis, Edoardo Puglisi, [ ... ], Marco Trevisan

How Many Genes Are Expressed in a Transcriptome? Estimation and Results for RNA-Seq

Luis Fernando García-Ortega, Octavio Martínez

3′-End Sequencing for Expression Quantification (3SEQ) from Archival Tumor Samples

Andrew H. Beck, Ziming Weng, [ ... ], Robert B. West

RNA-Seq Analyses Generate Comprehensive Transcriptomic Landscape and Reveal Complex Transcript Patterns in Hepatocellular Carcinoma

Qichao Huang, Biaoyang Lin, [ ... ], Zhi-Nan Chen

16S Classifier: A Tool for Fast and Accurate Taxonomic Classification of 16S rRNA Hypervariable Regions in Metagenomic Datasets

Nikhil Chaudhary, Ashok K. Sharma, [ ... ], Vineet K. Sharma

Statistical Guidance for Experimental Design and Data Analysis of Mutation Detection in Rare Monogenic Mendelian Diseases by Exome Sequencing

Degui Zhi, Rui Chen

Exome sequencing covers >98% of mutations identified on targeted next generation sequencing panels

Holly LaDuca, Kelly D. Farwell, [ ... ], Elizabeth C. Chao

Phenotype Sequencing: Identifying the Genes That Cause a Phenotype Directly from Pooled Sequencing of Independent Mutants

Marc A. Harper, Zugen Chen, [ ... ], Christopher J. Lee

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