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Fish genomics

Dynamics of tandemly repeated DNA sequences during evolution of diploid and tetraploid botiid loaches (Teleostei: Cobitoidea: Botiidae)

Alexandr Sember, Jörg Bohlen, Vendula Šlechtová, Marie Altmanová, Šárka Pelikánová, Petr Ráb

published 28 Mar 2018

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The draft genome of Kipferlia bialata reveals reductive genome evolution in fornicate parasites

Goro Tanifuji, Shun Takabayashi, Keitaro Kume, Mizue Takagi, Takuro Nakayama, Ryoma Kamikawa, Yuji Inagaki, Tetsuo Hashimoto

published 28 Mar 2018

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An efficient and reliable DNA-based sex identification method for archaeological Pacific salmonid (Oncorhynchus spp.) remains

Thomas C. A. Royle, Dionne Sakhrani, Camilla F. Speller, Virginia L. Butler, Robert H. Devlin, Aubrey Cannon, Dongya Y. Yang

published 14 Mar 2018

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Impact of the choice of reference genome on the ability of the core genome SNV methodology to distinguish strains of Salmonella enterica serovar Heidelberg

Valentine Usongo, Chrystal Berry, Khadidja Yousfi, Florence Doualla-Bell, Genevieve Labbé, Roger Johnson, Eric Fournier, Celine Nadon, Lawrence Goodridge, Sadjia Bekal

published 05 Feb 2018

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Genome-wide analysis of Atlantic salmon (Salmo salar) mucin genes and their role as biomarkers

Lene Rydal Sveen, Fabian Thomas Grammes, Elisabeth Ytteborg, Harald Takle, Sven Martin Jørgensen

published 13 Dec 2017

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Formal comment on: Piscine reovirus: Genomic and molecular phylogenetic analysis from farmed and wild salmonids collected on the Canada/US Pacific Coast

Molly J. T. Kibenge, Yingwei Wang, Alexandra Morton, Richard Routledge, Frederick S. B. Kibenge

published 30 Nov 2017

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EAMA: Empirically adjusted meta-analysis for large-scale simultaneous hypothesis testing in genomic experiments

Sinjini Sikdar, Somnath Datta, Susmita Datta

published 31 Oct 2017

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Genome Target Evaluator (GTEvaluator): A workflow exploiting genome dataset to measure the sensitivity and specificity of genetic markers

Arnaud Felten, Laurent Guillier, Nicolas Radomski, Michel-Yves Mistou, Renaud Lailler, Sabrina Cadel-Six

published 27 Jul 2017

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Evaluation of exome variants using the Ion Proton Platform to sequence error-prone regions

Heewon Seo, Yoomi Park, Byung Joo Min, Myung Eui Seo, Ju Han Kim

published 24 Jul 2017

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Expansion by whole genome duplication and evolution of the sox gene family in teleost fish

Emilien Voldoire, Frédéric Brunet, Magali Naville, Jean-Nicolas Volff, Delphine Galiana

published 24 Jul 2017

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Maternal inheritance of deltamethrin resistance in the salmon louse Lepeophtheirus salmonis (Krøyer) is associated with unique mtDNA haplotypes

Greta Carmona-Antoñanzas, Michaël Bekaert, Joseph L. Humble, Sally Boyd, William Roy, David I. Bassett, Ross D. Houston, Karim Gharbi, James E. Bron, Armin Sturm

published 12 Jul 2017

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Karyological evidence of hybridogenesis in Greenlings (Teleostei: Hexagrammidae)

Shota Suzuki, Katsutoshi Arai, Hiroyuki Munehara

published 05 Jul 2017

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Genotypic and phenotypic characterization of multidrug resistant Salmonella Typhimurium and Salmonella Kentucky strains recovered from chicken carcasses

Rizwana Tasmin, Nur A. Hasan, Christopher J. Grim, Ar’Quette Grant, Seon Young Choi, M. Samiul Alam, Rebecca Bell, Christopher Cavanaugh, Kannan V. Balan, Uma S. Babu, Salina Parveen

published 08 May 2017

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