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Evolutionary systematics

DOGMA: de novo assembly of densely labelled optical DNA maps using a matrix profile approach

Albertas Dvirnas, Luis Mario Leal-Garza, Zahra Abbaspour, Erik Fröbrant, Karolin Frykholm, Marie Wrande, Linus Sandegren, Fredrik Westerlund, Tobias Ambjörnsson

published 01 Dec 2025

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A new tandem repeat-based genotyping scheme for the global surveillance of Xanthomonas citri pv. mangiferaeindicae, an understudied bacterial pathogen of major importance to mango and cashew production

Karine Boyer, Cyrille Zombre, Laure Payan, Issa Wonni, Olivier Pruvost

published 26 Nov 2025

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Sampling informational properties of codon usage through the tree of life

Octavio Martínez, Manuel Humberto Reyes-Valdés, Neftalí Ochoa-Alejo

published 26 Nov 2025

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Using citizen science data to estimate trait and climate drivers of daily activity patterns in temperate butterflies

Jacob Idec, Caitlin J. Campbell, Michael Belitz, V. A. Akshay, Rob Guralnick

published 21 Nov 2025

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Parasites of the hermit crab Pagurus hirsutiusculus; distribution, prevalence, and thermal ecology

Madeleine H. Abbott, Christopher D.G. Harley, Harmony A. Martell, Carly Janusson, Matthew A. Lemay, Alyssa-Lois M. Gehman

published 19 Nov 2025

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Taxonomic characterization and cytotoxic potential of Vietnamese Ganoderma ellipsoideum against human breast cancer MCF-7 cells

Trang Thi Thu Nguyen, Phu Tran Vinh Pham, Viet An Thi Nguyen, Trinh Thi Tuyet Nguyen, Linh Thuoc Tran, Phu Chi Hieu Truong, Manh Hung Tran

published 14 Nov 2025

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Rapid on-site universal vertebrate species identification via multi-barcode nanopore sequencing

Emily C. Patterson, Sandrella Morrison-Lanjouw, Mark A. Jobling, Jon H. Wetton

published 11 Nov 2025

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Anopheles barbirostris in Indonesia: A more complex metapopulation than expected

Tri Baskoro Tunggul Satoto, Triwibowo Ambar Garjito, Shinta Shinta, Soleman Landi, Roger Frutos, Sylvie Manguin

published 10 Nov 2025

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Structural and evolutionary constraints shape adaptive landscapes of immune-related genes across mammalian phylogeny

Zhengtian Li, Mubbashar Hassan, Hafiz Ishfaq Ahmad, Muhammad Adnan Ashraf, Akhtar Rasool Asif, Iram Qadeer, Abid Hussain Shahzad, Shaista Abbas, Muhammad Sajid, Abdul Mateen, Irfan Ahmed, Jamal Muhammad, Sayyed Aun Muhammad, Farid S. Ataya

published 07 Nov 2025

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Genetic diversity and population structure of the natural population of Helicoverpa armigera in Northwest China using Genotyping by Sequencing (GBS) technology

Zhongxiong Ning, Jiali He, Jianhao Dong, Weizheng Li, Ruihao Li, Zhengzhen Gao, Dongmei Wang, Haiqiang Li, Bing Liu, Yujiao Wang, Wei Lu

published 06 Nov 2025

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Molecular phylogeny of the diatom genus Planothidium with the description of Paraplanothidium gen. nov. and Pseudoplanothidium gen. nov.

Natalia Tseplik, Yevhen Maltsev, Anton Glushchenko, Sergei Genkal, Maxim Kulikovskiy

published 06 Nov 2025

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Evaluating machine learning approaches for host prediction using H3 influenza genomic data

Hoc Tran, Olaf Berke, Nicole Ricker, Zvonimir Poljak

published 05 Nov 2025

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Phylogenomics of sigmodontine rodents (Cricetidae: Sigmodontinae): Cloud forests and Pliocene extinction explain the timing and spread of an iconic South American radiation

Max R. Bangs, Alexandre Reis Percequillo, Víctor Pacheco, Scott J. Steppan

published 04 Nov 2025

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