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Evolutionary genetics

Genome-wide identification and functional characterization of NPR1-like genes in Actinidia deliciosa

Weimin Zhong, Yuexia Wang, Shiming Han, Jihong Dong, Yumei Fang, Xiaoling Xu, Muhammad Umar Rasheed, Aiman Malik, Qurban Ali, Muhammad Ashfaq, Jia Zhou

published 13 Nov 2025

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Structural and evolutionary constraints shape adaptive landscapes of immune-related genes across mammalian phylogeny

Zhengtian Li, Mubbashar Hassan, Hafiz Ishfaq Ahmad, Muhammad Adnan Ashraf, Akhtar Rasool Asif, Iram Qadeer, Abid Hussain Shahzad, Shaista Abbas, Muhammad Sajid, Abdul Mateen, Irfan Ahmed, Jamal Muhammad, Sayyed Aun Muhammad, Farid S. Ataya

published 07 Nov 2025

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Simulating macroevolutionary trends and open-ended evolution with a novel mechanistic multi-level approach

Roberto Latorre, Miguel Brun-Usan, Gloria Fernández-Lázaro

published 06 Nov 2025

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Genome-wide identification and expression analysis of Phenylalanine Ammonia-Lyase (PAL) in cucumber

Jiaojiao Zhang, Kunyang Wang, Shuai Meng, Qiushuang Han, Ming Gao

published 06 Nov 2025

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Investigating the evolutionary dynamics and mutational pattern of SARS-CoV-2 spike gene on selected SARS-CoV-2 variants

Bachir Balech, Alessandra Lo Presti, Claudia Telegrafo, Lucia Maisto, Emanuela Giombini, Angela Di Martino, Luigina Ambrosio, Apollonia Tullo, Paola Stefanelli, on behalf of the Italian Genomic Laboratory Network

published 21 Oct 2025

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Identification and genetic characterization of Jingmen tick virus from ticks sampled in select regions of Kenya; 2022–2024

Lydia Mwasi, Samoel Khamadi, Wallace Bulimo, Johnson Kinyua, Santos Yalwala, Luis Pow Sang, Haynes Robert, Gerald G. Kellar, John Eads, Fredrick Eyase

published 13 Oct 2025

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Optimal bus bridging service for urban rail transit disruptions with stochastic passenger demand

Yicheng Liu, Tao Yang, Juan Su

published 07 Oct 2025

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Complete mitogenomes of two major dengue vectors Aedes aegypti and Aedes albopictus from Bangladesh: Insights from comparative genomics with global mitogenome diversity and phylogenetics

Md. Aminul Islam, Shefali Begum, Morjina Solaiman, Fatema-Tuz- Zohora, Sujan Kumar Datta, Khandaker Asif Ahmed, Md. Sagir Ahmed

published 30 Sep 2025

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An improved FOX optimization algorithm using adaptive exploration and exploitation for global optimization

Mahmood A. Jumaah, Yossra H. Ali, Tarik A. Rashid

published 18 Sep 2025

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Matrix games between full siblings in Mendelian populations

József Garay, Tamás Varga, Villő Csiszár, Tamás F. Móri, András Szilágyi

published 10 Sep 2025

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Evolutionary dynamics in plastomes and mitogenomes of diatoms

Aimee Caye G. Chang, Mailor W. W. Amaral, Megan Greenwood, Catherine Ikudaisi, Jingchun Li, Sarah E. Hamsher, Scott Miller, Patrick Kociolek

published 05 Sep 2025

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Investigating the role of FOX gene family in development and stress response in Labeo rohita: A multi-faceted analysis of phylogeny and genome characterization

Saima Naz, Urwah Ishaque, Ahmad Manan Mustafa Chatha, Muhammad Farooq, Qudrat Ullah, Shabana Naz, Marco Ragni, Ibrahim Alhidary

published 21 Aug 2025

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Transcriptome sequencing reveals the evolutionary histories and gene expression evolution in two related Pagurus species

Zakea Sultana, Isaac Adeyemi Babarinde, Masafumi Nozawa, Kazuho Ikeo, Akira Asakura, Tomoyuki Nakano

published 20 Aug 2025

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