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DNA sequencing

Knockout of CLTC gene reduces but not completely block SFTSV infection

Tiezhu Liu, Jiajia Li, Xueqi Wang, Tao Huang, Wei Wu, Aqian Li, Chuan Li, Xiaoxia Huang, Qin Wang, Dexin Li, Shiwen Wang, Mifang Liang

published 25 Aug 2023

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Exome sequencing identifies novel variants associated with non-syndromic hearing loss in the Iranian population

Jalal Vallian Broojeni, Arezu Kazemi, Halimeh Rezaei, Sadeq Vallian

published 10 Aug 2023

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Evaluation of an optimized germline exomes pipeline using BWA-MEM2 and Dragen-GATK tools

Nofe Alganmi, Heba Abusamra

published 03 Aug 2023

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Exome sequencing reveals IFT172 variants in patients with non-syndromic cholestatic liver disease

Magdaléna Neřoldová, Elżbieta Ciara, Janka Slatinská, Soňa Fraňková, Petra Lišková, Radana Kotalová, Janka Globinovská, Markéta Šafaříková, Lucie Pfeiferová, Hana Zůnová, Lenka Mrázová, Viktor Stránecký, Alena Vrbacká, Ondřej Fabián, Eva Sticová, Daniela Skanderová, Jan Šperl, Marta Kalousová, Tomáš Zima, Milan Macek, Joanna Pawlowska, A. S. Knisely, Stanislav Kmoch, Milan Jirsa

published 20 Jul 2023

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STRategy: A support system for collecting and analyzing next-generation sequencing data of short tandem repeats for forensic science

Nuttachai Kulthammanit, Tikumphorn Sathirapatya, Poonyapat Sukawutthiya, Hasnee Noh, Kornkiat Vongpaisarnsin, Duangdao Wichadakul

published 17 Jul 2023

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Liquid biopsy-based monitoring of residual disease in multiple myeloma by analysis of the rearranged immunoglobulin genes–A feasibility study

Anita Marx, Magdolna Osváth, Bence Szikora, Orsolya Pipek, István Csabai, Ákos Nagy, Csaba Bödör, Zsolt Matula, Ginette Nagy, András Bors, Ferenc Uher, Gábor Mikala, István Vályi-Nagy, Imre Kacskovics

published 26 May 2023

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PIK3CA mutations in breast cancer: A Tunisian series

Mariem Ben Rekaya, Farah Sassi, Essya Saied, Linda Bel Haj Kacem, Nada Mansouri, Sinda Zarrouk, Saifeddine Azouz, Soumaya Rammeh

published 17 May 2023

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Signal and noise in metabarcoding data

Zachary Gold, Andrew Olaf Shelton, Helen R. Casendino, Joe Duprey, Ramón Gallego, Amy Van Cise, Mary Fisher, Alexander J. Jensen, Erin D’Agnese, Elizabeth Andruszkiewicz Allan, Ana Ramón-Laca, Maya Garber-Yonts, Michaela Labare, Kim M. Parsons, Ryan P. Kelly

published 11 May 2023

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Evaluation of alcohol-free mouthwash for studies of the oral microbiome

Yukiko Yano, Emily Vogtmann, Alaina H. Shreves, Stephanie J. Weinstein, Amanda Black, Norma Diaz-Mayoral, Yunhu Wan, Weiyin Zhou, Xing Hua, Casey L. Dagnall, Amy Hutchinson, Kristine Jones, Belynda D. Hicks, Kathleen Wyatt, Michelle Brotzman, Nicole Gerlanc, Wen-Yi Huang, Paul S. Albert, Nicolas Wentzensen, Christian C. Abnet

published 27 Apr 2023

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High concordance rate of capillary electrophoresis workflow for microsatellite instability analysis and mismatch repair (MMR) immunostaining in colorectal carcinoma

Wenya Huang, Chung-Liang Ho, Chung-Ta Lee, Wan-Li Chen, Shu-Ching Yang, Nan-Haw Chow, Yi-Lin Chen

published 25 Apr 2023

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Wastewater surveillance of SARS-CoV-2 genomic populations on a country-wide scale through targeted sequencing

Florencia Cancela, Natalia Ramos, Davida S. Smyth, Claudia Etchebehere, Mabel Berois, Jesica Rodríguez, Caterina Rufo, Alicia Alemán, Liliana Borzacconi, Julieta López, Elizabeth González, Germán Botto, Starla G. Thornhill, Santiago Mirazo, Mónica Trujillo

published 21 Apr 2023

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GRACE: Graph autoencoder based single-cell clustering through ensemble similarity learning

Jun Seo Ha, Hyundoo Jeong

published 14 Apr 2023

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Direct and culture-enriched 16S rRNA sequencing of cecal content of healthy horses and horses with typhlocolitis

Luiza S. Zakia, Diego E. Gomez, Benjamin B. Caddey, Patrick Boerlin, Michael G. Surette, Luis G. Arroyo

published 13 Apr 2023

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