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DNA sequencing

Discovery of Western European R1b1a2 Y Chromosome Variants in 1000 Genomes Project Data: An Online Community Approach

Richard A. Rocca, Gregory Magoon, [ ... ], Andrew J. Grierson

Genomic Analysis of Pseudomonas putida Phage tf with Localized Single-Strand DNA Interruptions

Anatoly S. Glukhov, Antonina I. Krutilina, [ ... ], Leonid A. Kulakov

A Microfluidic Device for Preparing Next Generation DNA Sequencing Libraries and for Automating Other Laboratory Protocols That Require One or More Column Chromatography Steps

Swee Jin Tan, Huan Phan, [ ... ], William F. Burkholder

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

Robert Kofler, Pablo Orozco-terWengel, [ ... ], Christian Schlötterer

MetaSim—A Sequencing Simulator for Genomics and Metagenomics

Daniel C. Richter, Felix Ott, [ ... ], Daniel H. Huson

Systematic Design of 18S rRNA Gene Primers for Determining Eukaryotic Diversity in Microbial Consortia

Luisa W. Hugerth, Emilie E. L. Muller, [ ... ], Anders F. Andersson

Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

Dylan P. Smith, Kabir G. Peay

Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

Mehrdad Hajibabaei, Shadi Shokralla, [ ... ], Donald J. Baird

SLAF-seq: An Efficient Method of Large-Scale De Novo SNP Discovery and Genotyping Using High-Throughput Sequencing

Xiaowen Sun, Dongyuan Liu, [ ... ], Hongkun Zheng

Common Contaminants in Next-Generation Sequencing That Hinder Discovery of Low-Abundance Microbes

Martin Laurence, Christos Hatzis, Douglas E. Brash

Unlocking Short Read Sequencing for Metagenomics

Sébastien Rodrigue, Arne C. Materna, [ ... ], Sallie W. Chisholm

Benefits and Challenges with Applying Unique Molecular Identifiers in Next Generation Sequencing to Detect Low Frequency Mutations

Ruqin Kou, Ham Lam, [ ... ], Shihong Li

Assessment of Metagenomic Assembly Using Simulated Next Generation Sequencing Data

Daniel R. Mende, Alison S. Waller, [ ... ], Peer Bork

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