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DNA sequencing

Microsatellite development for Theridion evexum (Araneae: Theridiidae) using low-coverage genome sequencing and the MiMi script

Ruth Madrigal-Brenes, Gilbert Barrantes, Luis Sandoval, Eric J. Fuchs

published 15 Sep 2025

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Evaluation of the Xpert MTB/XDR test for detection of isoniazid, fluoroquinolones, and second-line injectable drugs resistance to Mycobacterium tuberculosis—Anhui Province, China

Ruiqing Zhang, Xundi Bao, Fangjin Bao, Chong Teng, Dongfang Xu, Zhou Liu, Yue Li, Bing Zhao, Hui Xia, Ruida Xing, Xichao Ou, Yanlin Zhao

published 12 Sep 2025

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Whole-Genome sequencing of Chikungunya Virus (CHIKV) from Pakistan: Detection of the East/Central/South African (ECSA) genotype during the 2024 outbreak in Mansehra

Massab Umair, Muhammad Yasir, Zunera Jamal, Rabia Hakim, Syed Yawar Saeed, Muhammad Salman, Azhar Iqbal, Muhammad Qasim Khan, Faisal Khanzada, Yusra Javed

published 26 Aug 2025

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Diagnostic accuracy of circulating tumor DNA for detection of ALK rearrangement in lung cancer: A systematic review and meta-analysis of 14 studies

Jiantong Sun, Lan Yang, Dan Liu, Hui Xue, Panwen Tian, Lei Li

published 25 Aug 2025

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Passage of human-origin influenza A virus in swine tracheal epithelial cells selects for adaptive mutations in the hemagglutinin gene

Jongsuk Mo, Lucas M. Ferreri, Ginger Geiger, Daniel R. Perez, Daniela S. Rajao

published 13 Aug 2025

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Stable preservation and recovery of methylation marks from FTA elute cards in species with nucleated red blood cells using a customized DNA extraction method

Livia Gerber, Sarah L. Whiteley, Erin E. Hahn, Clare E. Holleley

published 31 Jul 2025

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cONcat: Computational reconstruction of concatenated fragments from long Oxford Nanopore reads

Alexander J. Petri, Mai Thi-Huyen Nguyen, Anjali Rajwar, Erik Benson, Kristoffer Sahlin

published 24 Jul 2025

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Next-Generation Sequencing (NGS) in non-small cell lung carcinoma: A real-world experience in the public health system of Galicia (Northwest Spain)

Ihab Abdulkader-Nallib, José Manuel Cameselle-Teijeiro, Iván Lesende-Rodríguez, Raquel Pérez-Becerra, José Ramón Antúnez-López, Jorge García-González, Luis León-Mateos, María Sánchez-Ares

published 01 Jul 2025

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Evaluation of potential of targeted sequencing through mutational signature simulation

Keisuke Kodama, Yiwei Ling, Hiroshi Ichikawa, Toshifumi Wakai, Shujiro Okuda

published 25 Jun 2025

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Optimizing genomic diversity assessments for conservation of Bromus auleticus (Trinius ex Nees) using individual and pooled sequencing

Luciana Gillman, Federico Condón, Cesar Petroli, Mercedes Rivas

published 25 Jun 2025

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Prevalence and spectrum of germline BRCA1 and BRCA2 mutations in multiethnic cohort of breast cancer patients in Brunei Darussalam

Siti Nur Idayu Matusin, Nuramalina Mumin, Hazirah Zainal Abidin, Fatin Nurizzati Mohd Jaya, Zen Huat Lu, Mas Rina Wati Haji Abdul Hamid

published 18 Jun 2025

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Adaptation of PCR-based library preparation for MGI platform for cancer mutation testing in clinical setting

P.A. Shatalov, M.P. Raygorodskaya, A.P. Shinkarkina, A.A. Traspov, A.V. Murzaeva, Y.A. Doroshenko, I.A. Leuhina, V.A. Mileyko, M. V. Ivanov, T.V. Grigoreva, A. A. Lebedeva, E.M. Veselovsky, L.D. Belyaeva, E. V. Belova, A.D. Kaprin, P.V. Shegai

published 04 Jun 2025

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Host-pathogen protein interaction studies: quality control of cDNA libraries using nanopore sequencing

Cécile Schimmich, Mathilde Gondard, Gregory Caignard, José-Carlos Valle-Casuso, Damien Vitour, François Piumi

published 30 May 2025

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