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DNA sequencing

Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler

Daniel R. Zerbino, Gayle K. McEwen, Elliott H. Margulies, Ewan Birney

Next-Generation Phage Display: Integrating and Comparing Available Molecular Tools to Enable Cost-Effective High-Throughput Analysis

Emmanuel Dias-Neto, Diana N. Nunes, [ ... ], Wadih Arap

Exome Sequencing of a Multigenerational Human Pedigree

Dale Hedges, Dan Burges, [ ... ], Stephan Züchner

Molecular Characterization of a Novel Staphylococcus Aureus Surface Protein (SasC) Involved in Cell Aggregation and Biofilm Accumulation

Katrin Schroeder, Mario Jularic, [ ... ], Christine Heilmann

Diversity of 23S rRNA Genes within Individual Prokaryotic Genomes

Anna Pei, Carlos W. Nossa, [ ... ], Zhiheng Pei

Inherent Signals in Sequencing-Based Chromatin-ImmunoPrecipitation Control Libraries

Vinsensius B. Vega, Edwin Cheung, Nallasivam Palanisamy, Wing-Kin Sung

A Novel Endo-Hydrogenase Activity Recycles Hydrogen Produced by Nitrogen Fixation

Gordon Ng, Curtis G. S. Tom, [ ... ], Robert A. Ludwig

Direct Metagenomic Detection of Viral Pathogens in Nasal and Fecal Specimens Using an Unbiased High-Throughput Sequencing Approach

Shota Nakamura, Cheng-Song Yang, [ ... ], Takaaki Nakaya

Comparing Platforms for C. elegans Mutant Identification Using High-Throughput Whole-Genome Sequencing

Yufeng Shen, Sumeet Sarin, [ ... ], Itsik Pe'er

MetaSim—A Sequencing Simulator for Genomics and Metagenomics

Daniel C. Richter, Felix Ott, [ ... ], Daniel H. Huson

From Stop to Start: Tandem Gene Arrangement, Copy Number and Trans-Splicing Sites in the Dinoflagellate Amphidinium carterae

Tsvetan R. Bachvaroff, Allen R. Place

A Novel Campylobacter jejuni Sequence Type from a Culture-Negative Patient in The Gambia

Gerard A. J. Morris, Usman N. Ikumapayi, [ ... ], Richard A. Adegbola

High Throughput Genetic Analysis of Congenital Myasthenic Syndromes Using Resequencing Microarrays

Lisa Denning, Jennifer A. Anderson, [ ... ], Ricardo A. Maselli

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