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DNA sequencing

High-Throughput SuperSAGE for Digital Gene Expression Analysis of Multiple Samples Using Next Generation Sequencing

Hideo Matsumura, Kentaro Yoshida, Shujun Luo, Eiji Kimura, Takahiro Fujibe, Zayed Albertyn, Roberto A. Barrero, Detlev H. Krüger, Günter Kahl, Gary P. Schroth, Ryohei Terauchi

published 06 Aug 2010

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Unlocking Short Read Sequencing for Metagenomics

Sébastien Rodrigue, Arne C. Materna, Sonia C. Timberlake, Matthew C. Blackburn, Rex R. Malmstrom, Eric J. Alm, Sallie W. Chisholm

published 28 Jul 2010

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Read Length and Repeat Resolution: Exploring Prokaryote Genomes Using Next-Generation Sequencing Technologies

Matt J. Cahill, Claudio U. Köser, Nicholas E. Ross, John A. C. Archer

published 12 Jul 2010

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Utilizing Genotype Imputation for the Augmentation of Sequence Data

Brooke L. Fridley, Gregory Jenkins, Matthew E. Deyo-Svendsen, Scott Hebbring, Robert Freimuth

published 08 Jun 2010

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De Novo Assembly of the Complete Genome of an Enhanced Electricity-Producing Variant of Geobacter sulfurreducens Using Only Short Reads

Harish Nagarajan, Jessica E. Butler, Anna Klimes, Yu Qiu, Karsten Zengler, Joy Ward, Nelson D. Young, Barbara A. Methé, Bernhard Ø. Palsson, Derek R. Lovley, Christian L. Barrett

published 08 Jun 2010

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Rapid Multi-Locus Sequence Typing Using Microfluidic Biochips

Timothy D. Read, Rosemary S. Turingan, Christopher Cook, Heidi Giese, Ulrich Hans Thomann, Catherine C. Hogan, Eugene Tan, Richard F. Selden

published 12 May 2010

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Sensitivity of Noninvasive Prenatal Detection of Fetal Aneuploidy from Maternal Plasma Using Shotgun Sequencing Is Limited Only by Counting Statistics

H. Christina Fan, Stephen R. Quake

published 03 May 2010

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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community

Jenna L. Morgan, Aaron E. Darling, Jonathan A. Eisen

published 16 Apr 2010

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Increased Throughput by Parallelization of Library Preparation for Massive Sequencing

Sverker Lundin, Henrik Stranneheim, Erik Pettersson, Daniel Klevebring, Joakim Lundeberg

published 06 Apr 2010

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Whole Methylome Analysis by Ultra-Deep Sequencing Using Two-Base Encoding

Christina A. Bormann Chung, Victoria L. Boyd, Kevin J. McKernan, Yutao Fu, Cinna Monighetti, Heather E. Peckham, Melissa Barker

published 22 Feb 2010

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HIV Drug Resistance Surveillance Using Pooled Pyrosequencing

Hezhao Ji, Nathalie Massé, Shaun Tyler, Ben Liang, Yang Li, Harriet Merks, Morag Graham, Paul Sandstrom, James Brooks

published 17 Feb 2010

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The Behaviour of 5-Hydroxymethylcytosine in Bisulfite Sequencing

Yun Huang, William A. Pastor, Yinghua Shen, Mamta Tahiliani, David R. Liu, Anjana Rao

published 26 Jan 2010

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3′-End Sequencing for Expression Quantification (3SEQ) from Archival Tumor Samples

Andrew H. Beck, Ziming Weng, Daniela M. Witten, Shirley Zhu, Joseph W. Foley, Phil Lacroute, Cheryl L. Smith, Robert Tibshirani, Matt van de Rijn, Arend Sidow, Robert B. West

published 19 Jan 2010

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