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DNA extraction

Tissue distribution of Coxiella burnetii and antibody responses in macropods co-grazing with livestock in Queensland, Australia

Anita Tolpinrud, Mythili Tadepalli, John Stenos, Louis Lignereux, Anne-Lise Chaber, Joanne M. Devlin, Charles Caraguel, Mark A. Stevenson

published 21 May 2024

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Evaluation of DNAmAge in paired fresh, frozen, and formalin-fixed paraffin-embedded heart tissues

Paulina Pruszkowska-Przybylska, Mikkel Eriksen Dupont, Stine Bøttcher Jacobsen, Morten Smerup, Jacob Tfelt-Hansen, Niels Morling, Jeppe Dyrberg Andersen

published 08 May 2024

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Development, confirmation, and application of a seeded Escherichia coli process control organism to validate Salmonella enterica serovar Typhi environmental surveillance methods

Sarah E. Philo, Nicolette A. Zhou, Lorraine M. Lillis, Venkata Raghava, Dilip Abraham, Vinoth Kumar, Nirmal Kumar, Jonathan Rigby, Joanna Ciol Harrison, Christine S. Fagnant-Sperati, Alexandra L. Kossik, Angelo Q. W. Ong, Rachael Swanstrom, Elisabeth Burnor, Bethel Demeke, Nicola K. Beck, Jeffry H. Shirai, Stephen J. Libby, David S. Boyle, Nicholas Feasey, Gagandeep Kang, John Scott Meschke

published 07 May 2024

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Advancing responsible genomic analyses of ancient mollusc shells

Raphaël Martin-Roy, Jakob Thyrring, Xavier Mata, Pernille Bangsgaard, Ole Bennike, Gunvor Christiansen, Svend Funder, Anne Birgitte Gotfredsen, Kristian Murphy Gregersen, Camilla Haarby Hansen, Peter Carsten Ilsøe, Lutz Klassen, Inge Kjær Kristensen, Gerd Bindesbøl Ravnholt, Frédéric Marin, Clio Der Sarkissian

published 06 May 2024

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OpenCell: A low-cost, open-source, 3-in-1 device for DNA extraction

Aryan Gupta, Justin Yu, Elio J. Challita, Janet Standeven, M. Saad Bhamla

published 02 May 2024

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One-instrument, objective microsatellite instability analysis using high-resolution melt

Kamilla Kolding Bendixen, Sofie Forsberg-Pho, Giulia Dazio, Emeli Elisabeth Hansen, Sarah Kronborg Eriksen, Samantha Epistolio, Elisabetta Merlo, Renzo Boldorini, Tiziana Venesio, Alessandra Movilia, Cecilia Caprera, Eva Christensen Arnspang, Michael Børgesen, Ulf Bech Christensen, Milo Frattini, Rasmus Koefoed Petersen

published 25 Apr 2024

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In silico assessment of 18S rDNA metabarcoding markers for the characterization of nematode communities

Gentile Francesco Ficetola, Alessia Guerrieri, Isabel Cantera, Aurelie Bonin

published 05 Apr 2024

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High-throughput DNA extraction and cost-effective miniaturized metagenome and amplicon library preparation of soil samples for DNA sequencing

Thomas Bygh Nymann Jensen, Sebastian Mølvang Dall, Simon Knutsson, Søren Michael Karst, Mads Albertsen

published 04 Apr 2024

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Genetic identification of three CITES-listed sharks using a paper-based Lab-on-a-Chip (LOC)

Guuske P. Tiktak, Alexandria Gabb, Margarita Brandt, Fernando R. Diz, Karla Bravo-Vásquez, César Peñaherrera-Palma, Jonathan Valdiviezo-Rivera, Aaron Carlisle, Louise M. Melling, Bradley Cain, David Megson, Richard Preziosi, Kirsty J. Shaw

published 04 Apr 2024

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High-throughput sequencing of insect specimens with sub-optimal DNA preservation using a practical, plate-based Illumina-compatible Tn5 transposase library preparation method

Lauren Cobb, Erik de Muinck, Spyros Kollias, Morten Skage, Gregor D. Gilfillan, Markus A. K. Sydenham, Shuo-Wang Qiao, Bastiaan Star

published 22 Mar 2024

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Evaluation of a rapid Loop Mediated Isothermal Amplification (LAMP) test for the laboratory diagnosis of sexually transmitted infections

Martina Brandolini, Laura Grumiro, Patrizia Farabegoli, Giorgio Dirani, Silvia Zannoli, Irene Zaghi, Massimiliano Guerra, Francesca Taddei, Giulia Gatti, Anna Marzucco, Maria Sofia Montanari, Alessandra Mistral De Pascali, Simona Semprini, Monica Cricca, Vittorio Sambri

published 21 Mar 2024

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High rate of high-risk human papillomavirus among benign and breast cancer patients in Ethiopia

Esmael Besufikad Belachew, Adey Feleke Desta, Andargachewu Mulu, Dinikisira Bekele Deneke, Dessalegn Abeje Tefera, Ashenafi Alemu, Endale Anberber, Daniel Beshah, Selfu Girma, Dareskedar Tsehay Sewasew, Tesfaye Sisay Tessema, Rawleigh Howe

published 20 Mar 2024

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Detection of pathogenic Leptospira with rapid extraction followed by recombinase polymerase amplification (RPA) and quantitative polymerase chain reaction (qPCR) assay-A comprehensive study from Sri Lanka

Hansi Uduwawala, Aresha Manamperi, Gayana P. S. Gunaratna, Lilani Karunanayake, Arianna Ceruti, Ahmed Abd El Wahed, Lakkumar Fernando, Ranjan Premaratna, Menaka Hapugoda

published 15 Mar 2024

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