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DNA extraction

High-molecular weight DNA extraction, clean-up and size selection for long-read sequencing

Ashley Jones, Cynthia Torkel, David Stanley, Jamila Nasim, Justin Borevitz, Benjamin Schwessinger

published 15 Jul 2021

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Evaluating extraction methods to study canine urine microbiota

Ryan Mrofchak, Christopher Madden, Morgan V. Evans, Vanessa L. Hale

published 09 Jul 2021

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High-resolution genotyping of Lymphogranuloma Venereum (LGV) strains of Chlamydia trachomatis in London using multi-locus VNTR analysis-ompA genotyping (MLVA-ompA)

Chloe Manning, Colette O’Neill, Ian N. Clarke, Monica Rebec, Penelope R. Cliff, Peter Marsh

published 08 Jul 2021

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A CRISPR-based assay for the study of eukaryotic DNA repair onboard the International Space Station

Sarah Stahl-Rommel, David Li, Michelle Sung, Rebecca Li, Aarthi Vijayakumar, Kutay Deniz Atabay, G. Guy Bushkin, Christian L. Castro, Kevin D. Foley, D. Scott Copeland, Sarah L. Castro-Wallace, Ezequiel Alvarez Saavedra, Emily J. Gleason, Sebastian Kraves

published 30 Jun 2021

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Evaluation of DNA extraction yield from a chlorinated drinking water distribution system

Ratna E. Putri, Lan Hee Kim, Nadia Farhat, Mashael Felemban, Pascal E. Saikaly, Johannes S. Vrouwenvelder

published 24 Jun 2021

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A new sensitive and fast assay for the detection of EGFR mutations in liquid biopsies

Steffen Grann Jensen, Samantha Epistolio, Cesilie Lind Madsen, Majbritt Hauge Kyneb, Alice Riva, Alessia Paganotti, Jessica Barizzi, Rasmus Koefoed Petersen, Michael Børgesen, Francesca Molinari, Renzo Boldorini, Jan Lorenzen, Erik Sørensen, Ulf Bech Christensen, Estrid Høgdall, Milo Frattini

published 24 Jun 2021

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Understanding the complexity of disease-climate interactions for rice bacterial panicle blight under tropical conditions

Johanna Echeverri-Rico, Eliel Petro, Paola A. Fory, Gloria M. Mosquera, Jillian M. Lang, Jan E. Leach, Juan D. Lobaton, Gabriel Garcés, Ricardo Perafán, Nelson Amezquita, Shirley Toro, Brayan Mora, Juan B. Cuasquer, Julián Ramirez-Villegas, Maria Camila Rebolledo, Edgar A. Torres

published 26 May 2021

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LPCAT1-TERT fusions are uniquely recurrent in epithelioid trophoblastic tumors and positively regulate cell growth

Gavin R. Oliver, Sofia Marcano-Bonilla, Jonathan Quist, Ezequiel J. Tolosa, Eriko Iguchi, Amy A. Swanson, Nicole L. Hoppman, Tanya Schwab, Ashley Sigafoos, Naresh Prodduturi, Jesse S. Voss, Shannon M. Knight, Jin Zhang, Numrah Fadra, Raul Urrutia, Michael Zimmerman, Jan B. Egan, Anthony G. Bilyeu, Jin Jen, Ema Veras, Rema’a Al-Safi, Matthew Block, Sarah Kerr, Martin E. Fernandez-Zapico, John K. Schoolmeester, Eric W. Klee

published 25 May 2021

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Characterization of oral swab samples for diagnosis of pulmonary tuberculosis

Rachel C. Wood, Alfred Andama, Gleda Hermansky, Stephen Burkot, Lucy Asege, Mukwatamundu Job, David Katumba, Martha Nakaye, Sandra Z. Mwebe, Jerry Mulondo, Christine M. Bachman, Kevin P. Nichols, Anne-Laure M. Le Ny, Corrie Ortega, Rita N. Olson, Kris M. Weigel, Alaina M. Olson, Damian Madan, David Bell, Adithya Cattamanchi, William Worodria, Fred C. Semitala, Akos Somoskovi, Gerard A. Cangelosi, Kyle J. Minch

published 17 May 2021

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Evaluation of high-resolution melt curve analysis for rapid differentiation of Campylobacter hepaticus from other species in birds

Petrina Young, Pol Tarce, Sadhana Adhikary, Joanne Connolly, Tim Crawshaw, Seyed A. Ghorashi

published 13 May 2021

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Water pre-filtration methods to improve environmental DNA detection by real-time PCR and metabarcoding

Kazuto Takasaki, Hiroki Aihara, Takanobu Imanaka, Takahiro Matsudaira, Keita Tsukahara, Atsuko Usui, Sora Osaki, Hideyuki Doi

published 07 May 2021

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Investigating variability in microbial community composition in replicate environmental DNA samples down lake sediment cores

John K. Pearman, Georgia Thomson-Laing, Jamie D. Howarth, Marcus J. Vandergoes, Lucy Thompson, Andrew Rees, Susanna A. Wood

published 03 May 2021

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The effects of flavonoids, green tea polyphenols and coffee on DMBA induced LINE-1 DNA hypomethylation

Laszlo Szabo, Richard Molnar, Andras Tomesz, Arpad Deutsch, Richard Darago, Ghodratollah Nowrasteh, Timea Varjas, Balazs Nemeth, Ferenc Budan, Istvan Kiss

published 20 Apr 2021

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