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Database and informatics methods

Recombination and Population Mosaic of a Multifunctional Viral Gene, Adeno-Associated Virus cap

Yasuhiro Takeuchi, Richard Myers, Olivier Danos

published 20 Feb 2008

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Sequence Evidence in the Archaeal Genomes that tRNAs Emerged Through the Combination of Ancestral Genes as 5′ and 3′ tRNA Halves

Kosuke Fujishima, Junichi Sugahara, Masaru Tomita, Akio Kanai

published 20 Feb 2008

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Hsf1 Activation Inhibits Rapamycin Resistance and TOR Signaling in Yeast Revealed by Combined Proteomic and Genetic Analysis

Sricharan Bandhakavi, Hongwei Xie, Brennon O'Callaghan, Hiroshi Sakurai, Do-Hyung Kim, Timothy J. Griffin

published 13 Feb 2008

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A Three-Stage Colonization Model for the Peopling of the Americas

Andrew Kitchen, Michael M. Miyamoto, Connie J. Mulligan

published 13 Feb 2008

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Accumulating Variation at Conserved Sites in Potyvirus Genomes Is Driven by Species Discovery and Affects Degenerate Primer Design

Linda Zheng, Paul J. Wayper, Adrian J. Gibbs, Mathieu Fourment, Brendan C. Rodoni, Mark J. Gibbs

published 13 Feb 2008

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Predicted Functional RNAs within Coding Regions Constrain Evolutionary Rates of Yeast Proteins

Charles D. Warden, Seong-Ho Kim, Soojin V. Yi

published 13 Feb 2008

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An Update on MyoD Evolution in Teleosts and a Proposed Consensus Nomenclature to Accommodate the Tetraploidization of Different Vertebrate Genomes

Daniel J. Macqueen, Ian A. Johnston

published 06 Feb 2008

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The Plasmodium Export Element Revisited

Jan Alexander Hiss, Jude Marek Przyborski, Florian Schwarte, Klaus Lingelbach, Gisbert Schneider

published 06 Feb 2008

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Comparative Bacterial Proteomics: Analysis of the Core Genome Concept

Stephen J. Callister, Lee Ann McCue, Joshua E. Turse, Matthew E. Monroe, Kenneth J. Auberry, Richard D. Smith, Joshua N. Adkins, Mary S. Lipton

published 06 Feb 2008

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Functional Group and Substructure Searching as a Tool in Metabolomics

Masaaki Kotera, Andrew G. McDonald, Sinéad Boyce, Keith F. Tipton

published 06 Feb 2008

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Natural Selection and Adaptive Evolution of Leptin in the Ochotona Family Driven by the Cold Environmental Stress

Jie Yang, Zhen Long Wang, Xin Quan Zhao, De Peng Wang, De Lin Qi, Bao Hong Xu, Yong Hong Ren, Hui Fang Tian

published 23 Jan 2008

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The Sorcerer II Global Ocean Sampling Expedition: Metagenomic Characterization of Viruses within Aquatic Microbial Samples

Shannon J. Williamson, Douglas B. Rusch, Shibu Yooseph, Aaron L. Halpern, Karla B. Heidelberg, John I. Glass, Cynthia Andrews-Pfannkoch, Douglas Fadrosh, Christopher S. Miller, Granger Sutton, Marvin Frazier, J. Craig Venter

published 23 Jan 2008

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Chasing Migration Genes: A Brain Expressed Sequence Tag Resource for Summer and Migratory Monarch Butterflies (Danaus plexippus)

Haisun Zhu, Amy Casselman, Steven M. Reppert

published 09 Jan 2008

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