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Computer software

A Parallel Implementation of the Network Identification by Multiple Regression (NIR) Algorithm to Reverse-Engineer Regulatory Gene Networks

Francesco Gregoretti, Vincenzo Belcastro, Diego di Bernardo, Gennaro Oliva

published 21 Apr 2010

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Optimization of Duplex Stability and Terminal Asymmetry for shRNA Design

Olga V. Matveeva, Yibin Kang, Alexey N. Spiridonov, Pål Sætrom, Vladimir A. Nemtsov, Aleksey Y. Ogurtsov, Yury D. Nechipurenko, Svetlana A. Shabalina

published 20 Apr 2010

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BioTorrents: A File Sharing Service for Scientific Data

Morgan G. I. Langille, Jonathan A. Eisen

published 14 Apr 2010

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A Proteomic Approach for the Diagnosis of Bacterial Meningitis

Sarah Jesse, Petra Steinacker, Stefan Lehnert, Martin Sdzuj, Lukas Cepek, Hayrettin Tumani, Olaf Jahn, Holger Schmidt, Markus Otto

published 08 Apr 2010

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PGC-1alpha Down-Regulation Affects the Antioxidant Response in Friedreich's Ataxia

Daniele Marmolino, Mario Manto, Fabio Acquaviva, Paola Vergara, Ajay Ravella, Antonella Monticelli, Massimo Pandolfo

published 07 Apr 2010

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MrGrid: A Portable Grid Based Molecular Replacement Pipeline

Jason W. Schmidberger, Mark A. Bate, Cyril F. Reboul, Steve G. Androulakis, Jennifer M. N. Phan, James C. Whisstock, Wojtek J. Goscinski, David Abramson, Ashley M. Buckle

published 06 Apr 2010

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Deep Sequencing of Target Linkage Assay-Identified Regions in Familial Breast Cancer: Methods, Analysis Pipeline and Troubleshooting

Juan Manuel Rosa-Rosa, Francisco Javier Gracia-Aznárez, Emily Hodges, Guillermo Pita, Michelle Rooks, Zhenyu Xuan, Arindam Bhattacharjee, Leonardo Brizuela, José M. Silva, Gregory J. Hannon, Javier Benitez

published 02 Apr 2010

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TiArA: A Virtual Appliance for the Analysis of Tiling Array Data

Jason A. Greenbaum, Erika Assarsson, Jo L. Chung, Steven Head, Alessandro Sette, Bjoern Peters

published 01 Apr 2010

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A Quantitative Image Cytometry Technique for Time Series or Population Analyses of Signaling Networks

Yu-ichi Ozaki, Shinsuke Uda, Takeshi H. Saito, Jaehoon Chung, Hiroyuki Kubota, Shinya Kuroda

published 01 Apr 2010

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Diversity in the Glucose Transporter-4 Gene (SLC2A4) in Humans Reflects the Action of Natural Selection along the Old-World Primates Evolution

Eduardo Tarazona-Santos, Cristina Fabbri, Meredith Yeager, Wagner C. Magalhaes, Laurie Burdett, Andrew Crenshaw, Davide Pettener, Stephen J. Chanock

published 23 Mar 2010

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Medicaid Coverage for Tobacco Dependence Treatments in Massachusetts and Associated Decreases in Smoking Prevalence

Thomas Land, Donna Warner, Mark Paskowsky, Ayesha Cammaerts, LeAnn Wetherell, Rachel Kaufmann, Lei Zhang, Ann Malarcher, Terry Pechacek, Lois Keithly

published 18 Mar 2010

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Genetic Variations in HSPA8 Gene Associated with Coronary Heart Disease Risk in a Chinese Population

Meian He, Huan Guo, Xiaobo Yang, Li Zhou, Xiaomin Zhang, Longxian Cheng, Hesong Zeng, Frank B. Hu, Robert M. Tanguay, Tangchun Wu

published 16 Mar 2010

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Extreme Female Promiscuity in a Non-Social Invertebrate Species

Marina Panova, Johan Boström, Tobias Hofving, Therese Areskoug, Anders Eriksson, Bernhard Mehlig, Tuuli Mäkinen, Carl André, Kerstin Johannesson

published 11 Mar 2010

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