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Computational techniques

Identifying and Seeing beyond Multiple Sequence Alignment Errors Using Intra-Molecular Protein Covariation

Russell J. Dickson, Lindi M. Wahl, Andrew D. Fernandes, Gregory B. Gloor

published 28 Jun 2010

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progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

Aaron E. Darling, Bob Mau, Nicole T. Perna

published 25 Jun 2010

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Characterization of S3Pvac Anti-Cysticercosis Vaccine Components: Implications for the Development of an Anti-Cestodiasis Vaccine

Dunia Rassy, Raúl J. Bobes, Gabriela Rosas, Victor H. Anaya, Klaus Brehm, Beatriz Hernández, Jacquelynne Cervantes, Saúl Pedraza, Julio Morales, Nelly Villalobos, Aline S. de Aluja, Juan P. Laclette, Caris M. Nunes, Germano F. Biondi, Gladis Fragoso, Marisela Hernández, Edda Sciutto

published 23 Jun 2010

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Employing Information Theoretic Measures and Mutagenesis to Identify Residues Critical for Drug-Proton Antiport Function in Mdr1p of Candida albicans

Khyati Kapoor, Mohd Rehan, Andrew M. Lynn, Rajendra Prasad

published 10 Jun 2010

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Validation of Coevolving Residue Algorithms via Pipeline Sensitivity Analysis: ELSC and OMES and ZNMI, Oh My!

Christopher A. Brown, Kevin S. Brown

published 01 Jun 2010

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Agrin Binds BMP2, BMP4 and TGFβ1

László Bányai, Peter Sonderegger, László Patthy

published 21 May 2010

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Detection and Architecture of Small Heat Shock Protein Monomers

Pierre Poulain, Jean-Christophe Gelly, Delphine Flatters

published 07 Apr 2010

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MUSTANG-MR Structural Sieving Server: Applications in Protein Structural Analysis and Crystallography

Arun S. Konagurthu, Cyril F. Reboul, Jason W. Schmidberger, James A. Irving, Arthur M. Lesk, Peter J. Stuckey, James C. Whisstock, Ashley M. Buckle

published 06 Apr 2010

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Reciprocally Coupled Residues Crucial for Protein Kinase Pak2 Activity Calculated by Statistical Coupling Analysis

Yuan-Hao Hsu, Jolinda A. Traugh

published 01 Mar 2010

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Large-Scale Sequence Analysis of Hemagglutinin of Influenza A Virus Identifies Conserved Regions Suitable for Targeting an Anti-Viral Response

Leepakshi Sahini, Anna Tempczyk-Russell, Ritu Agarwal

published 17 Feb 2010

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CYNTENATOR: Progressive Gene Order Alignment of 17 Vertebrate Genomes

Christian Rödelsperger, Christoph Dieterich

published 28 Jan 2010

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Insertion and Deletion Processes in Recent Human History

Per Sjödin, Thomas Bataillon, Mikkel H. Schierup

published 19 Jan 2010

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Sequence and Structural Analysis of the Chitinase Insertion Domain Reveals Two Conserved Motifs Involved in Chitin-Binding

Hai Li, Lesley H. Greene

published 13 Jan 2010

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