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Computational techniques

Correlation Analysis for Protein Evolutionary Family Based on Amino Acid Position Mutations and Application in PDZ Domain

Qi-Shi Du, Cheng-Hua Wang, Si-Ming Liao, Ri-Bo Huang

published 06 Oct 2010

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Insight into Antigenic Diversity of VAR2CSA-DBL5ε Domain from Multiple Plasmodium falciparum Placental Isolates

Sédami Gnidehou, Leon Jessen, Stéphane Gangnard, Caroline Ermont, Choukri Triqui, Mickael Quiviger, Juliette Guitard, Ole Lund, Philippe Deloron, Nicaise Tuikue Ndam

published 01 Oct 2010

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Neuroimaging Study Designs, Computational Analyses and Data Provenance Using the LONI Pipeline

Ivo Dinov, Kamen Lozev, Petros Petrosyan, Zhizhong Liu, Paul Eggert, Jonathan Pierce, Alen Zamanyan, Shruthi Chakrapani, John Van Horn, D. Stott Parker, Rico Magsipoc, Kelvin Leung, Boris Gutman, Roger Woods, Arthur Toga

published 28 Sep 2010

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Adjacent Nucleotide Dependence in ncRNA and Order-1 SCFG for ncRNA Identification

Thomas K. F. Wong, Tak-Wah Lam, Wing-Kin Sung, Siu-Ming Yiu

published 28 Sep 2010

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Murasaki: A Fast, Parallelizable Algorithm to Find Anchors from Multiple Genomes

Kris Popendorf, Hachiya Tsuyoshi, Yasunori Osana, Yasubumi Sakakibara

published 24 Sep 2010

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Cheminformatics-Based Drug Design Approach for Identification of Inhibitors Targeting the Characteristic Residues of MMP-13 Hemopexin Domain

Roopa Kothapalli, Asif M. Khan, Basappa, Anupriya Gopalsamy, Yap Seng Chong, Loganath Annamalai

published 31 Aug 2010

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Identifying and Seeing beyond Multiple Sequence Alignment Errors Using Intra-Molecular Protein Covariation

Russell J. Dickson, Lindi M. Wahl, Andrew D. Fernandes, Gregory B. Gloor

published 28 Jun 2010

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progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

Aaron E. Darling, Bob Mau, Nicole T. Perna

published 25 Jun 2010

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Characterization of S3Pvac Anti-Cysticercosis Vaccine Components: Implications for the Development of an Anti-Cestodiasis Vaccine

Dunia Rassy, Raúl J. Bobes, Gabriela Rosas, Victor H. Anaya, Klaus Brehm, Beatriz Hernández, Jacquelynne Cervantes, Saúl Pedraza, Julio Morales, Nelly Villalobos, Aline S. de Aluja, Juan P. Laclette, Caris M. Nunes, Germano F. Biondi, Gladis Fragoso, Marisela Hernández, Edda Sciutto

published 23 Jun 2010

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Employing Information Theoretic Measures and Mutagenesis to Identify Residues Critical for Drug-Proton Antiport Function in Mdr1p of Candida albicans

Khyati Kapoor, Mohd Rehan, Andrew M. Lynn, Rajendra Prasad

published 10 Jun 2010

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Validation of Coevolving Residue Algorithms via Pipeline Sensitivity Analysis: ELSC and OMES and ZNMI, Oh My!

Christopher A. Brown, Kevin S. Brown

published 01 Jun 2010

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Agrin Binds BMP2, BMP4 and TGFβ1

László Bányai, Peter Sonderegger, László Patthy

published 21 May 2010

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Detection and Architecture of Small Heat Shock Protein Monomers

Pierre Poulain, Jean-Christophe Gelly, Delphine Flatters

published 07 Apr 2010

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