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Computational techniques

An Integrated Pipeline for de Novo Assembly of Microbial Genomes

Andrew Tritt, Jonathan A. Eisen, Marc T. Facciotti, Aaron E. Darling

Lessons Learned from Quantitative Dynamical Modeling in Systems Biology

Andreas Raue, Marcel Schilling, [ ... ], Jens Timmer

A workflow with R: Phylogenetic analyses and visualizations using mitochondrial cytochrome b gene sequences

Emine Toparslan, Kemal Karabag, Ugur Bilge

New machine learning method for image-based diagnosis of COVID-19

Mohamed Abd Elaziz, Khalid M. Hosny, [ ... ], Ahmed T. Sahlol

RETRACTED: A deep facial recognition system using computational intelligent algorithms

Diaa Salama AbdELminaam, Abdulrhman M. Almansori, Mohamed Taha, Elsayed Badr

Rapid 16S rRNA Next-Generation Sequencing of Polymicrobial Clinical Samples for Diagnosis of Complex Bacterial Infections

Stephen J. Salipante, Dhruba J. Sengupta, [ ... ], Noah G. Hoffman

A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

Julie D. Thompson, Benjamin Linard, Odile Lecompte, Olivier Poch

Fingerprint Recognition with Identical Twin Fingerprints

Xunqiang Tao, Xinjian Chen, Xin Yang, Jie Tian

Phylo: A Citizen Science Approach for Improving Multiple Sequence Alignment

Alexander Kawrykow, Gary Roumanis, [ ... ], Jérôme Waldispühl

RAxML and FastTree: Comparing Two Methods for Large-Scale Maximum Likelihood Phylogeny Estimation

Kevin Liu, C. Randal Linder, Tandy Warnow

MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

Wan-Ping Lee, Michael P. Stromberg, [ ... ], Gabor T. Marth

MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit

Jens Roat Kultima, Shinichi Sunagawa, [ ... ], Peer Bork

Vertebrate Vitellogenin Gene Duplication in Relation to the “3R Hypothesis”: Correlation to the Pelagic Egg and the Oceanic Radiation of Teleosts

Roderick Nigel Finn, Børge A. Kristoffersen

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