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Computational pipelines

SparkGA2: Production-quality memory-efficient Apache Spark based genome analysis framework

Hamid Mushtaq, Nauman Ahmed, Zaid Al-Ars

A feature selection strategy for gene expression time series experiments with hidden Markov models

Roberto A. Cárdenas-Ovando, Edith A. Fernández-Figueroa, [ ... ], Claudia Rangel-Escareño

gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output

Juhana I. Kammonen, Olli-Pekka Smolander, [ ... ], Petri Auvinen

Cardiovascular disease risk prediction using automated machine learning: A prospective study of 423,604 UK Biobank participants

Ahmed M. Alaa, Thomas Bolton, [ ... ], Mihaela van der Schaar

From invisibility to readability: Recovering the ink of Herculaneum

Clifford Seth Parker, Stephen Parsons, [ ... ], William Brent Seales

elPrep 4: A multithreaded framework for sequence analysis

Charlotte Herzeel, Pascal Costanza, [ ... ], Wilfried Verachtert

An improved machine learning pipeline for urinary volatiles disease detection: Diagnosing diabetes

Andrea S. Martinez-Vernon, James A. Covington, [ ... ], Richard S. Savage

Automated measurement of fetal head circumference using 2D ultrasound images

Thomas L. A. van den Heuvel, Dagmar de Bruijn, Chris L. de Korte, Bram van Ginneken

An efficient control flow validation method using redundant computing capacity of dual-processor architecture

Qingran Wang, Wei Guo, Jizeng Wei

Atlas pre-selection strategies to enhance the efficiency and accuracy of multi-atlas brain segmentation tools

Chenfei Ye, Ting Ma, [ ... ], Susumu Mori

Ffuzz: Towards full system high coverage fuzz testing on binary executables

Bin Zhang, Jiaxi Ye, [ ... ], Chaojing Tang

Numerical research on the lateral global buckling characteristics of a high temperature and pressure pipeline with two initial imperfections

Wenbin Liu, Aimin Liu

Accurately tracking single-cell movement trajectories in microfluidic cell sorting devices

Jenny Jeong, Nicholas J. Frohberg, [ ... ], Peng Qiu

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