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Computational pipelines

Kuura—An automated workflow for analyzing WES and WGS data

Dhanaprakash Jambulingam, Venkat Subramaniam Rathinakannan, [ ... ], Vidal Fey

A hybrid Cycle GAN-based lightweight road perception pipeline for road dataset generation for Urban mobility

Balaji Ganesh Rajagopal, Manish Kumar, [ ... ], Abdelhalim Azam

Implementation and empirical evaluation of a quantum machine learning pipeline for local classification

Enrico Zardini, Enrico Blanzieri, Davide Pastorello

From multimodal features to behavioural inferences: A pipeline to model engagement in human-robot interactions

Soham Joshi, Arpitha Malavalli, Shrisha Rao

Towards accelerating model parallelism in distributed deep learning systems

Hyeonseong Choi, Byung Hyun Lee, Se Young Chun, Jaehwan Lee

Evaluation of an optimized germline exomes pipeline using BWA-MEM2 and Dragen-GATK tools

Nofe Alganmi, Heba Abusamra

Modular pipeline for reconstruction and localization of implanted intracranial ECoG and sEEG electrodes

Daniel J. Soper, Dustine Reich, [ ... ], Angelique C. Paulk

Evaluation of data processing pipelines on real-world electronic health records data for the purpose of measuring patient similarity

Maria Pikoula, Constantinos Kallis, [ ... ], Spiros Denaxas

Extracting relevant predictive variables for COVID-19 severity prognosis: An exhaustive comparison of feature selection techniques

Miren Hayet-Otero, Fernando García-García, [ ... ], with the COVID-19 & Air Pollution Working Group

Inflated expectations: Rare-variant association analysis using public controls

Jung Kim, Danielle M. Karyadi, [ ... ], Douglas R. Stewart

Nanopore sequencing data analysis using Microsoft Azure cloud computing service

Linh Truong, Felipe Ayora, [ ... ], Dianne De Santis

NGSpop: A desktop software that supports population studies by identifying sequence variations from next-generation sequencing data

Dong-Jun Lee, Taesoo Kwon, [ ... ], Tae-Ho Lee

MetaWorks: A flexible, scalable bioinformatic pipeline for high-throughput multi-marker biodiversity assessments

Teresita M. Porter, Mehrdad Hajibabaei

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