Advertisement

Browse Subject Areas

?

Click through the PLOS taxonomy to find articles in your field.

For more information about PLOS Subject Areas, click here.

Computational pipelines

Inferring Phenotypic Properties from Single-Cell Characteristics

Peng Qiu

gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output

Juhana I. Kammonen, Olli-Pekka Smolander, [ ... ], Petri Auvinen

i3Drefine Software for Protein 3D Structure Refinement and Its Assessment in CASP10

Debswapna Bhattacharya, Jianlin Cheng

FeAture Explorer (FAE): A tool for developing and comparing radiomics models

Yang Song, Jing Zhang, [ ... ], Guang Yang

optPBN: An Optimisation Toolbox for Probabilistic Boolean Networks

Panuwat Trairatphisan, Andrzej Mizera, [ ... ], Thomas Sauter

PSimScan: Algorithm and Utility for Fast Protein Similarity Search

Anna Kaznadzey, Natalia Alexandrova, Vladimir Novichkov, Denis Kaznadzey

Allele Workbench: Transcriptome Pipeline and Interactive Graphics for Allele-Specific Expression

Carol A. Soderlund, William M. Nelson, Stephen A. Goff

elPrep 4: A multithreaded framework for sequence analysis

Charlotte Herzeel, Pascal Costanza, [ ... ], Wilfried Verachtert

An Automated, Adaptive Framework for Optimizing Preprocessing Pipelines in Task-Based Functional MRI

Nathan W. Churchill, Robyn Spring, [ ... ], Stephen C. Strother

Ultra Deep Sequencing of Listeria monocytogenes sRNA Transcriptome Revealed New Antisense RNAs

Sebastian Behrens, Stefanie Widder, [ ... ], Torsten Hain

A Semi-Automated Pipeline for the Segmentation of Rhesus Macaque Hippocampus: Validation across a Wide Age Range

Michael R. Hunsaker, David G. Amaral

Sequence-Based Classification Using Discriminatory Motif Feature Selection

Hao Xiong, Daniel Capurso, Śaunak Sen, Mark R. Segal

GeneTEFlow: A Nextflow-based pipeline for analysing gene and transposable elements expression from RNA-Seq data

Xiaochuan Liu, Jadwiga R. Bienkowska, Wenyan Zhong

Advertisement

Create a weekly email alert for: Computational pipelines

You can change these options by clicking profile then "Alerts and Notifications"