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Computational pipelines

Deep learning-enhanced automated mitochondrial segmentation in FIB-SEM images using an entropy-weighted ensemble approach

Yubraj Gupta, Rainer Heintzmann, Carlos Costa, Rui Jesus, Eduardo Pinho

published 26 Nov 2024

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Data science and automation in the process of theorizing: Machine learning’s power of induction in the co-duction cycle

Daan Kolkman, Gwendolyn K. Lee, Arjen van Witteloostuijn

published 04 Nov 2024

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Domain affiliated distilled knowledge transfer for improved convergence of Ph-negative MPN identifier

Md Tanzim Reza, Md. Golam Rabiul Alam, Rafeed Rahman, Shakib Mahmud Dipto

published 27 Sep 2024

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An architecture for COVID-19 analysis and detection using big data, AI, and data architectures

Ahmed Mohammed Alghamdi, Waleed A. Al Shehri, Jameel Almalki, Najlaa Jannah, Faisal S. Alsubaei

published 01 Aug 2024

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uafR: An R package that automates mass spectrometry data processing

Chase A. Stratton, Yvonne Thompson, Konilo Zio, William R. Morrison III, Ebony G. Murrell

published 05 Jul 2024

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Machine learning with taxonomic family delimitation aids in the classification of ephemeral beaked whale events in passive acoustic monitoring

Alba Solsona-Berga, Annamaria I. DeAngelis, Danielle M. Cholewiak, Jennifer S. Trickey, Liam Mueller-Brennan, Kaitlin E. Frasier, Sofie M. Van Parijs, Simone Baumann-Pickering

published 04 Jun 2024

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Accelerating electrostatic particle-in-cell simulation: A novel FPGA-based approach for efficient plasma investigations

Abedalmuhdi Almomany, Muhammed Sutcu, Babul Salam K. S. M. Kader Ibrahim

published 03 Jun 2024

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Exploring memory synchronization and performance considerations for FPGA platform using the high-abstracted OpenCL framework: Benchmarks development and analysis

Abedalmuhdi Almomany, Amin Jarrah, Muhammed Sutcu

published 13 May 2024

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Study on design optimization of GFRP tubular column composite structure based on machine learning method

Peiyao Shu, Chengqi Xue, Gengpei Zhang, Tianyi Deng

published 26 Apr 2024

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Bioinformatics pipeline for the systematic mining genomic and proteomic variation linked to rare diseases: The example of monogenic diabetes

Ksenia G. Kuznetsova, Jakub Vašíček, Dafni Skiadopoulou, Janne Molnes, Miriam Udler, Stefan Johansson, Pål Rasmus Njølstad, Alisa Manning, Marc Vaudel

published 18 Apr 2024

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MicroBundleCompute: Automated segmentation, tracking, and analysis of subdomain deformation in cardiac microbundles

Hiba Kobeissi, Javiera Jilberto, M. Çağatay Karakan, Xining Gao, Samuel J. DePalma, Shoshana L. Das, Lani Quach, Jonathan Urquia, Brendon M. Baker, Christopher S. Chen, David Nordsletten, Emma Lejeune

published 26 Mar 2024

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BetaBuddy: An automated end-to-end computer vision pipeline for analysis of calcium fluorescence dynamics in β-cells

Anne M. Alsup, Kelli Fowlds, Michael Cho, Jacob M. Luber

published 15 Mar 2024

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Assessment of differentially private synthetic data for utility and fairness in end-to-end machine learning pipelines for tabular data

Mayana Pereira, Meghana Kshirsagar, Sumit Mukherjee, Rahul Dodhia, Juan Lavista Ferres, Rafael de Sousa

published 05 Feb 2024

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