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Computational pipelines

Integrating simulated and experimental data to identify mitochondrial bioenergetic defects in Parkinson’s Disease models

Sandeep Chenna, Alvin Joselin, Pierre Theurey, Daniele Bano, Paola Pizzo, Maria Ankarcrona, David S. Park, Jochen H. Prehn, Niamh M. C. Connolly

published 05 Jan 2026

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Identification and classification of oil and gas pipeline intru-sion events based on 1-D CNN network

Han Qin, Xiaoli Huang, Xingcheng Wang, Zhaoliang Zhou

published 23 Dec 2025

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DOGMA: de novo assembly of densely labelled optical DNA maps using a matrix profile approach

Albertas Dvirnas, Luis Mario Leal-Garza, Zahra Abbaspour, Erik Fröbrant, Karolin Frykholm, Marie Wrande, Linus Sandegren, Fredrik Westerlund, Tobias Ambjörnsson

published 01 Dec 2025

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Random rotational embedding Bayesian optimization for human-in-the-loop personalized music generation

Miguel Marcos, Lorenzo Mur-Labadia, Ruben Martinez-Cantin

published 21 Nov 2025

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Impact of processing and analysis methodology on thalamic susceptibility assessment in multiple sclerosis

Fahad Salman, Niels Bergsland, Michael G. Dwyer, Jack A. Reeves, Abhisri Ramesh, Dejan Jakimovski, Bianca Weinstock-Guttman, Robert Zivadinov, Ferdinand Schweser

published 14 Nov 2025

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Pipelined and conflict-free number theoretic transform accelerator for CRYSTALS-Kyber on FPGA

Ayesha Waris, Arshad Aziz, Bilal Muhammad Khan

published 11 Nov 2025

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Transfer learning-driven prediction of oil and gaspipeline corrosion rates in small sample scenarios

Pujun Long, Guopan Yang, Haiyang Liu, Weiwei Deng, Mi Liang

published 16 Oct 2025

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Supervised spike sorting feasibility of noisy single-electrode extracellular recordings: Systematic study of human C-nociceptors recorded via microneurography

Alina Troglio, Peter Konradi, Andrea Fiebig, Ariadna Pérez Garriga, Rainer Röhrig, James Dunham, Ekaterina Kutafina, Barbara Namer

published 26 Sep 2025

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Enhancing adverse drug reaction data quality in Canada: A high-precision pipeline for medication name standardization and enrichment

Niaz Chalabianloo, Sheikh S. Abdullah, Mohammad Ali Omrani, Atefeh Jafari, Kamran Sedig, Flory Tsobo Muanda

published 25 Sep 2025

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Explainable AI to unveil cellular autophagy dynamics

Oriana Presacan, María Hernández Mesa, Alexandru C. Aldea, Siri Andresen, Amani Al Outa, Julie Aarmo Johannessen, Bogdan Ionescu, Helene Knævelsrud, Michael A. Riegler

published 11 Sep 2025

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Identification of BOLD engine deficiencies and suggestions for improvement based on a curated Tachina (Diptera) record set

Frederik Stein, Oliver Gailing

published 29 Aug 2025

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Ocotillo optimization-driven deep learning for bone marrow cytology classification

Doaa Sami Khafaga, El-Sayed M. El-kenawy, Faris H. Rizk, Marwa M. Eid, Ehsaneh Khodadadi, Nima Khodadadi

published 29 Aug 2025

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VNC-Dist: A machine learning-based semi-automated pipeline for quantification of neuronal position in the C. elegans ventral nerve cord

Saber Saharkhiz, Wesley Chan, Chloe B. Kirezi, Mearhyn Petite, Tony Roenspies, Theodore J. Perkins, Antonio Colavita

published 28 Aug 2025

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