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Computational pipelines

SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner

Ruibang Luo, Thomas Wong, [ ... ], Tak-Wah Lam

Real-Time Analysis and Visualization for Single-Molecule Based Super-Resolution Microscopy

Adel Kechkar, Deepak Nair, [ ... ], Jean-Baptiste Sibarita

Simultaneous Analysis and Quality Assurance for Diffusion Tensor Imaging

Carolyn B. Lauzon, Andrew J. Asman, [ ... ], Bennett A. Landman

The Genome Sequence of Lone Star Virus, a Highly Divergent Bunyavirus Found in the Amblyomma americanum Tick

Andrea Swei, Brandy J. Russell, [ ... ], Charles Y. Chiu

Assessing the Consequences of Denoising Marker-Based Metagenomic Data

John M. Gaspar, W. Kelley Thomas

Visual to Parametric Interaction (V2PI)

Scotland C. Leman, Leanna House, [ ... ], Chris North

PSimScan: Algorithm and Utility for Fast Protein Similarity Search

Anna Kaznadzey, Natalia Alexandrova, Vladimir Novichkov, Denis Kaznadzey

Reliable Identification of Deep Sulcal Pits: The Effects of Scan Session, Scanner, and Surface Extraction Tool

Kiho Im, Jong-Min Lee, [ ... ], P. Ellen Grant

MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit

Jens Roat Kultima, Shinichi Sunagawa, [ ... ], Peer Bork

An Integrated Pipeline for de Novo Assembly of Microbial Genomes

Andrew Tritt, Jonathan A. Eisen, Marc T. Facciotti, Aaron E. Darling

Implications of Pyrosequencing Error Correction for Biological Data Interpretation

Matthew G. Bakker, Zheng J. Tu, James M. Bradeen, Linda L. Kinkel

Inferring Phenotypic Properties from Single-Cell Characteristics

Peng Qiu

Two-Stage Clustering (TSC): A Pipeline for Selecting Operational Taxonomic Units for the High-Throughput Sequencing of PCR Amplicons

Xiao-Tao Jiang, Hai Zhang, [ ... ], Hong-Wei Zhou

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