Advertisement

Browse Subject Areas

?

Click through the PLOS taxonomy to find articles in your field.

For more information about PLOS Subject Areas, click here.

Computational pipelines

Transcriptator: An Automated Computational Pipeline to Annotate Assembled Reads and Identify Non Coding RNA

Kumar Parijat Tripathi, Daniela Evangelista, Antonio Zuccaro, Mario Rosario Guarracino

published 18 Nov 2015

Loading metrics information...

Metrics unavailable. Please check back later.

Efficient In Silico Identification of a Common Insertion in the MAK Gene which Causes Retinitis Pigmentosa

Kinga M. Bujakowska, Joseph White, Emily Place, Mark Consugar, Jason Comander

published 11 Nov 2015

Loading metrics information...

Metrics unavailable. Please check back later.

Computational Design of Hypothetical New Peptides Based on a Cyclotide Scaffold as HIV gp120 Inhibitor

Apiwat Sangphukieo, Wanapinun Nawae, Teeraphan Laomettachit, Umaporn Supasitthimethee, Marasri Ruengjitchatchawalya

published 30 Oct 2015

Loading metrics information...

Metrics unavailable. Please check back later.

A Novel Byte-Substitution Architecture for the AES Cryptosystem

Fakir Sharif Hossain, Md. Liakot Ali

published 22 Oct 2015

Loading metrics information...

Metrics unavailable. Please check back later.

NGS-QCbox and Raspberry for Parallel, Automated and Rapid Quality Control Analysis of Large-Scale Next Generation Sequencing (Illumina) Data

Mohan A. V. S. K. Katta, Aamir W. Khan, Dadakhalandar Doddamani, Mahendar Thudi, Rajeev K. Varshney

published 13 Oct 2015

Loading metrics information...

Metrics unavailable. Please check back later.

JMS: An Open Source Workflow Management System and Web-Based Cluster Front-End for High Performance Computing

David K. Brown, David L. Penkler, Thommas M. Musyoka, Özlem Tastan Bishop

published 17 Aug 2015

Loading metrics information...

Metrics unavailable. Please check back later.

ExScalibur: A High-Performance Cloud-Enabled Suite for Whole Exome Germline and Somatic Mutation Identification

Riyue Bao, Kyle Hernandez, Lei Huang, Wenjun Kang, Elizabeth Bartom, Kenan Onel, Samuel Volchenboum, Jorge Andrade

published 13 Aug 2015

Loading metrics information...

Metrics unavailable. Please check back later.

Morphological Profiles of RNAi-Induced Gene Knockdown Are Highly Reproducible but Dominated by Seed Effects

Shantanu Singh, Xiaoyun Wu, Vebjorn Ljosa, Mark-Anthony Bray, Federica Piccioni, David E. Root, John G. Doench, Jesse S. Boehm, Anne E. Carpenter

published 21 Jul 2015

Loading metrics information...

Metrics unavailable. Please check back later.

A Benchmark Data Set to Evaluate the Illumination Robustness of Image Processing Algorithms for Object Segmentation and Classification

Arif ul Maula Khan, Ralf Mikut, Markus Reischl

published 20 Jul 2015

Loading metrics information...

Metrics unavailable. Please check back later.

elPrep: High-Performance Preparation of Sequence Alignment/Map Files for Variant Calling

Charlotte Herzeel, Pascal Costanza, Dries Decap, Jan Fostier, Joke Reumers

published 16 Jul 2015

Loading metrics information...

Metrics unavailable. Please check back later.

An Automated, Adaptive Framework for Optimizing Preprocessing Pipelines in Task-Based Functional MRI

Nathan W. Churchill, Robyn Spring, Babak Afshin-Pour, Fan Dong, Stephen C. Strother

published 10 Jul 2015

Loading metrics information...

Metrics unavailable. Please check back later.

Inexpensive and Highly Reproducible Cloud-Based Variant Calling of 2,535 Human Genomes

Suyash S. Shringarpure, Andrew Carroll, Francisco M. De La Vega, Carlos D. Bustamante

published 25 Jun 2015

Loading metrics information...

Metrics unavailable. Please check back later.

Comparison of the Association of Sac Growth and Coil Compaction with Recurrence in Coil Embolized Cerebral Aneurysms

Anna L. Hoppe, Madhavan L. Raghavan, David M. Hasan

published 20 Apr 2015

Loading metrics information...

Metrics unavailable. Please check back later.

Advertisement

Create a weekly email alert for: Computational pipelines

You can change these options by clicking profile then "Alerts and Notifications"