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Cluster analysis

Quantifying Phenotypic Variation in Isogenic Caenorhabditis elegans Expressing Phsp-16.2::gfp by Clustering 2D Expression Patterns

Alexander K. Seewald, James Cypser, Alexander Mendenhall, Thomas Johnson

published 19 Jul 2010

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Jerarca: Efficient Analysis of Complex Networks Using Hierarchical Clustering

Rodrigo Aldecoa, Ignacio Marín

published 14 Jul 2010

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GPS-SNO: Computational Prediction of Protein S-Nitrosylation Sites with a Modified GPS Algorithm

Yu Xue, Zexian Liu, Xinjiao Gao, Changjiang Jin, Longping Wen, Xuebiao Yao, Jian Ren

published 24 Jun 2010

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Establishing the Proteome of Normal Human Cerebrospinal Fluid

Steven E. Schutzer, Tao Liu, Benjamin H. Natelson, Thomas E. Angel, Athena A. Schepmoes, Samuel O. Purvine, Kim K. Hixson, Mary S. Lipton, David G. Camp II, Patricia K. Coyle, Richard D. Smith, Jonas Bergquist

published 11 Jun 2010

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A Rapid Method for Characterization of Protein Relatedness Using Feature Vectors

Kareem Carr, Eleanor Murray, Ebenezer Armah, Rong L. He, Stephen S.-T. Yau

published 05 Mar 2010

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An Optimized Pentaplex PCR for Detecting DNA Mismatch Repair-Deficient Colorectal Cancers

Ajay Goel, Takeshi Nagasaka, Richard Hamelin, C. Richard Boland

published 24 Feb 2010

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Identifying Prototypical Components in Behaviour Using Clustering Algorithms

Elke Braun, Bart Geurten, Martin Egelhaaf

published 22 Feb 2010

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A Novel Alignment-Free Method for Comparing Transcription Factor Binding Site Motifs

Minli Xu, Zhengchang Su

published 20 Jan 2010

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A Genome-Wide Analysis of Array-Based Comparative Genomic Hybridization (CGH) Data to Detect Intra-Species Variations and Evolutionary Relationships

Apratim Mitra, George Liu, Jiuzhou Song

published 24 Nov 2009

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Widespread Dysregulation of MiRNAs by MYCN Amplification and Chromosomal Imbalances in Neuroblastoma: Association of miRNA Expression with Survival

Isabella Bray, Kenneth Bryan, Suzanne Prenter, Patrick G. Buckley, Niamh H. Foley, Derek M. Murphy, Leah Alcock, Pieter Mestdagh, Jo Vandesompele, Frank Speleman, Wendy B. London, Patrick W. McGrady, Desmond G. Higgins, Anne O'Meara, Maureen O'Sullivan, Raymond L. Stallings

published 16 Nov 2009

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Determining Protein Complex Connectivity Using a Probabilistic Deletion Network Derived from Quantitative Proteomics

Mihaela E. Sardiu, Joshua M. Gilmore, Michael J. Carrozza, Bing Li, Jerry L. Workman, Laurence Florens, Michael P. Washburn

published 06 Oct 2009

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Alteration of Gene Expression Signatures of Cortical Differentiation and Wound Response in Lethal Clear Cell Renal Cell Carcinomas

Hongjuan Zhao, Zongming Ma, Robert Tibshirani, John P. T. Higgins, Börje Ljungberg, James D. Brooks

published 25 Jun 2009

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Lysophosphatidic Acid-Induced Transcriptional Profile Represents Serous Epithelial Ovarian Carcinoma and Worsened Prognosis

Mandi M. Murph, Wenbin Liu, Shuangxing Yu, Yiling Lu, Hassan Hall, Bryan T. Hennessy, John Lahad, Marci Schaner, Åslaug Helland, Gunnar Kristensen, Anne-Lise Børresen-Dale, Gordon B. Mills

published 15 May 2009

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