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Cluster analysis

Identifying Prototypical Components in Behaviour Using Clustering Algorithms

Elke Braun, Bart Geurten, Martin Egelhaaf

published 22 Feb 2010

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A Novel Alignment-Free Method for Comparing Transcription Factor Binding Site Motifs

Minli Xu, Zhengchang Su

published 20 Jan 2010

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A Genome-Wide Analysis of Array-Based Comparative Genomic Hybridization (CGH) Data to Detect Intra-Species Variations and Evolutionary Relationships

Apratim Mitra, George Liu, Jiuzhou Song

published 24 Nov 2009

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Widespread Dysregulation of MiRNAs by MYCN Amplification and Chromosomal Imbalances in Neuroblastoma: Association of miRNA Expression with Survival

Isabella Bray, Kenneth Bryan, Suzanne Prenter, Patrick G. Buckley, Niamh H. Foley, Derek M. Murphy, Leah Alcock, Pieter Mestdagh, Jo Vandesompele, Frank Speleman, Wendy B. London, Patrick W. McGrady, Desmond G. Higgins, Anne O'Meara, Maureen O'Sullivan, Raymond L. Stallings

published 16 Nov 2009

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Determining Protein Complex Connectivity Using a Probabilistic Deletion Network Derived from Quantitative Proteomics

Mihaela E. Sardiu, Joshua M. Gilmore, Michael J. Carrozza, Bing Li, Jerry L. Workman, Laurence Florens, Michael P. Washburn

published 06 Oct 2009

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Alteration of Gene Expression Signatures of Cortical Differentiation and Wound Response in Lethal Clear Cell Renal Cell Carcinomas

Hongjuan Zhao, Zongming Ma, Robert Tibshirani, John P. T. Higgins, Börje Ljungberg, James D. Brooks

published 25 Jun 2009

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Lysophosphatidic Acid-Induced Transcriptional Profile Represents Serous Epithelial Ovarian Carcinoma and Worsened Prognosis

Mandi M. Murph, Wenbin Liu, Shuangxing Yu, Yiling Lu, Hassan Hall, Bryan T. Hennessy, John Lahad, Marci Schaner, Åslaug Helland, Gunnar Kristensen, Anne-Lise Børresen-Dale, Gordon B. Mills

published 15 May 2009

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Can Ethograms Be Automatically Generated Using Body Acceleration Data from Free-Ranging Birds?

Kentaro Q. Sakamoto, Katsufumi Sato, Mayumi Ishizuka, Yutaka Watanuki, Akinori Takahashi, Francis Daunt, Sarah Wanless

published 30 Apr 2009

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Transcription Factor Binding Sites Are Genetic Determinants of Retroviral Integration in the Human Genome

Barbara Felice, Claudia Cattoglio, Davide Cittaro, Anna Testa, Annarita Miccio, Giuliana Ferrari, Lucilla Luzi, Alessandra Recchia, Fulvio Mavilio

published 24 Feb 2009

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Using Pathway Signatures as Means of Identifying Similarities among Microarray Experiments

Luca Beltrame, Lisa Rizzetto, Raffaele Paola, Philippe Rocca-Serra, Luca Gambineri, Cristina Battaglia, Duccio Cavalieri

published 06 Jan 2009

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TranscriptomeBrowser: A Powerful and Flexible Toolbox to Explore Productively the Transcriptional Landscape of the Gene Expression Omnibus Database

Fabrice Lopez, Julien Textoris, Aurélie Bergon, Gilles Didier, Elisabeth Remy, Samuel Granjeaud, Jean Imbert, Catherine Nguyen, Denis Puthier

published 23 Dec 2008

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A Novel Method Incorporating Gene Ontology Information for Unsupervised Clustering and Feature Selection

Shireesh Srivastava, Linxia Zhang, Rong Jin, Christina Chan

published 04 Dec 2008

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Randomization in Laboratory Procedure Is Key to Obtaining Reproducible Microarray Results

Hyuna Yang, Christina A. Harrington, Kristina Vartanian, Christopher D. Coldren, Rob Hall, Gary A. Churchill

published 14 Nov 2008

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