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BLAST algorithm

A deep transcriptomic resource for the copepod crustacean Labidocera madurae: A potential indicator species for assessing near shore ecosystem health

Vittoria Roncalli, Andrew E. Christie, Stephanie A. Sommer, Matthew C. Cieslak, Daniel K. Hartline, Petra H. Lenz

published 24 Oct 2017

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Graphettes: Constant-time determination of graphlet and orbit identity including (possibly disconnected) graphlets up to size 8

Adib Hasan, Po-Chien Chung, Wayne Hayes

published 23 Aug 2017

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Cyclophilin A potentiates TRIM5α inhibition of HIV-1 nuclear import without promoting TRIM5α binding to the viral capsid

Mallori Burse, Jiong Shi, Christopher Aiken

published 02 Aug 2017

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BrEPS 2.0: Optimization of sequence pattern prediction for enzyme annotation

Christian-Alexander Dudek, Henning Dannheim, Dietmar Schomburg

published 27 Jul 2017

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The effects of sampling on the efficiency and accuracy of k−mer indexes: Theoretical and empirical comparisons using the human genome

Meznah Almutairy, Eric Torng

published 07 Jul 2017

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Predicting human protein subcellular localization by heterogeneous and comprehensive approaches

Chi-Hua Tung, Chi-Wei Chen, Han-Hao Sun, Yen-Wei Chu

published 28 Jun 2017

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Unidentifiable by morphology: DNA barcoding of plant material in local markets in Iran

Abdolbaset Ghorbani, Yousef Saeedi, Hugo J. de Boer

published 18 Apr 2017

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DNA barcoding evaluation and implications for phylogenetic relationships in Lauraceae from China

Zhi-Fang Liu, Xiu-Qin Ci, Lang Li, Hsi-Wen Li, John G. Conran, Jie Li

published 17 Apr 2017

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KrillDB: A de novo transcriptome database for the Antarctic krill (Euphausia superba)

Gabriele Sales, Bruce E. Deagle, Enrica Calura, Paolo Martini, Alberto Biscontin, Cristiano De Pittà, So Kawaguchi, Chiara Romualdi, Bettina Meyer, Rodolfo Costa, Simon Jarman

published 10 Feb 2017

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A comprehensive software suite for protein family construction and functional site prediction

David Renfrew Haft, Daniel H. Haft

published 09 Feb 2017

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Assessing the genome level diversity of Listeria monocytogenes from contaminated ice cream and environmental samples linked to a listeriosis outbreak in the United States

Yi Chen, Yan Luo, Phillip Curry, Ruth Timme, David Melka, Matthew Doyle, Mickey Parish, Thomas S. Hammack, Marc W. Allard, Eric W. Brown, Errol A. Strain

published 06 Feb 2017

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Development of a Feature and Template-Assisted Assembler and Application to the Analysis of a Foot-and-Mouth Disease Virus Genotyping Microarray

Roger W. Barrette, Jessica M. Rowland, Frederic R. Grau, Michael T. McIntosh

published 03 Jan 2017

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Deep, Staged Transcriptomic Resources for the Novel Coleopteran Models Atrachya menetriesi and Callosobruchus maculatus

Matthew A. Benton, Nathan J. Kenny, Kai H. Conrads, Siegfried Roth, Jeremy A. Lynch

published 01 Dec 2016

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