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BLAST algorithm

CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen, Clifford J. Beall, [ ... ], Eugene J. Leys

DNA Barcoding of Recently Diverged Species: Relative Performance of Matching Methods

Robin van Velzen, Emanuel Weitschek, Giovanni Felici, Freek T. Bakker

Comparative Analysis of Functional Metagenomic Annotation and the Mappability of Short Reads

Rogan Carr, Elhanan Borenstein

De Novo Transcriptome Assembly (NGS) of Curcuma longa L. Rhizome Reveals Novel Transcripts Related to Anticancer and Antimalarial Terpenoids

Ramasamy S. Annadurai, Ramprasad Neethiraj, [ ... ], Raja C. Mugasimangalam

Taxonomic Characterization of Honey Bee (Apis mellifera) Pollen Foraging Based on Non-Overlapping Paired-End Sequencing of Nuclear Ribosomal Loci

R. Scott Cornman, Clint R. V. Otto, Deborah Iwanowicz, Jeffery S. Pettis

The Internal Transcribed Spacer (ITS) Region and trnhH-psbA Are Suitable Candidate Loci for DNA Barcoding of Tropical Tree Species of India

Abhinandan Mani Tripathi, Antariksh Tyagi, [ ... ], Sribash Roy

Unidentifiable by morphology: DNA barcoding of plant material in local markets in Iran

Abdolbaset Ghorbani, Yousef Saeedi, Hugo J. de Boer

A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance

Martin Christen Frølund Thomsen, Johanne Ahrenfeldt, [ ... ], Ole Lund

Profile Hidden Markov Models for the Detection of Viruses within Metagenomic Sequence Data

Peter Skewes-Cox, Thomas J. Sharpton, Katherine S. Pollard, Joseph L. DeRisi

DNA Barcode Goes Two-Dimensions: DNA QR Code Web Server

Chang Liu, Linchun Shi, [ ... ], Shilin Chen

OTU Analysis Using Metagenomic Shotgun Sequencing Data

Xiaolin Hao, Ting Chen

CMG-Biotools, a Free Workbench for Basic Comparative Microbial Genomics

Tammi Vesth, Karin Lagesen, Öncel Acar, David Ussery

iTools: A Framework for Classification, Categorization and Integration of Computational Biology Resources

Ivo D. Dinov, Daniel Rubin, [ ... ], Arthur W. Toga

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