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BLAST algorithm

BrEPS 2.0: Optimization of sequence pattern prediction for enzyme annotation

Christian-Alexander Dudek, Henning Dannheim, Dietmar Schomburg

Pattern-Selection Based Power Analysis and Discrimination of Low- and High-Grade Myelodysplastic Syndromes Study Using SNP Arrays

Xiaorong Yang, Xiaobo Zhou, [ ... ], Stephen T. C. Wong

A thorough analysis of the contribution of experimental, derived and sequence-based predicted protein-protein interactions for functional annotation of proteins

Stavros Makrodimitris, Marcel Reinders, Roeland van Ham

Proposal of Smith-Waterman algorithm on FPGA to accelerate the forward and backtracking steps

Fabio F. de Oliveira, Leonardo A. Dias, Marcelo A. C. Fernandes

SNBRFinder: A Sequence-Based Hybrid Algorithm for Enhanced Prediction of Nucleic Acid-Binding Residues

Xiaoxia Yang, Jia Wang, Jun Sun, Rong Liu

Deep, Staged Transcriptomic Resources for the Novel Coleopteran Models Atrachya menetriesi and Callosobruchus maculatus

Matthew A. Benton, Nathan J. Kenny, [ ... ], Jeremy A. Lynch

Probing the Rare Biosphere of the North-West Mediterranean Sea: An Experiment with High Sequencing Effort

Bibiana G. Crespo, Philip J. Wallhead, Ramiro Logares, Carlos Pedrós-Alió

Curated multiple sequence alignment for the Adenomatous Polyposis Coli (APC) gene and accuracy of in silico pathogenicity predictions

Alexander D. Karabachev, Dylan J. Martini, [ ... ], Marc S. Greenblatt

A Rank-Based Sequence Aligner with Applications in Phylogenetic Analysis

Liviu P. Dinu, Radu Tudor Ionescu, Alexandru I. Tomescu

Graphettes: Constant-time determination of graphlet and orbit identity including (possibly disconnected) graphlets up to size 8

Adib Hasan, Po-Chien Chung, Wayne Hayes

A fast comparative genome browser for diverse bacteria and archaea

Morgan N. Price, Adam P. Arkin

NAPAbench 2: A network synthesis algorithm for generating realistic protein-protein interaction (PPI) network families

Hyun-Myung Woo, Hyundoo Jeong, Byung-Jun Yoon

Whole-genome based strain identification of fowlpox virus directly from cutaneous tissue and propagated virus

Kinza Asif, Denise O’Rourke, [ ... ], Amir H. Noormohammadi

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