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BLAST algorithm

Sequence Imputation of HPV16 Genomes for Genetic Association Studies

Benjamin Smith, Zigui Chen, [ ... ], Robert D. Burk

Common Peptides Study of Aminoacyl-tRNA Synthetases

Assaf Gottlieb, Milana Frenkel-Morgenstern, Mark Safro, David Horn

Calpain Cleavage Prediction Using Multiple Kernel Learning

David A. duVerle, Yasuko Ono, Hiroyuki Sorimachi, Hiroshi Mamitsuka

Evolution of the Karyopherin-β Family of Nucleocytoplasmic Transport Factors; Ancient Origins and Continued Specialization

Amanda J. O'Reilly, Joel B. Dacks, Mark C. Field

Representative Proteomes: A Stable, Scalable and Unbiased Proteome Set for Sequence Analysis and Functional Annotation

Chuming Chen, Darren A. Natale, [ ... ], Raja Mazumder

jMOTU and Taxonerator: Turning DNA Barcode Sequences into Annotated Operational Taxonomic Units

Martin Jones, Anisah Ghoorah, Mark Blaxter

CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen, Clifford J. Beall, [ ... ], Eugene J. Leys

Tasting Soil Fungal Diversity with Earth Tongues: Phylogenetic Test of SATé Alignments for Environmental ITS Data

Zheng Wang, R. Henrik Nilsson, [ ... ], Jeffrey P. Townsend

Chromatin Immunoprecipitation to Analyze DNA Binding Sites of HMGA2

Nina Winter, Rolf Nimzyk, [ ... ], Jörn Bullerdiek

Evaluating Ortholog Prediction Algorithms in a Yeast Model Clade

Leonidas Salichos, Antonis Rokas

Prediction of Antimicrobial Peptides Based on Sequence Alignment and Feature Selection Methods

Ping Wang, Lele Hu, [ ... ], Kuo-Chen Chou

Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets

Robert Schmieder, Robert Edwards

Pyrosequencing of Antibiotic-Contaminated River Sediments Reveals High Levels of Resistance and Gene Transfer Elements

Erik Kristiansson, Jerker Fick, [ ... ], D. G. Joakim Larsson

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