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BLAST algorithm

DsTRD: Danshen Transcriptional Resource Database

Yuxuan Shao, Jiabo Wei, [ ... ], Weibo Jin

The PARIGA Server for Real Time Filtering and Analysis of Reciprocal BLAST Results

Massimiliano Orsini, Simone Carcangiu, [ ... ], Anna Tramontano

De Novo Transcriptome Analysis of Two Seahorse Species (Hippocampus erectus and H. mohnikei) and the Development of Molecular Markers for Population Genetics

Qiang Lin, Wei Luo, Shiming Wan, Zexia Gao

A novel chloroplast super-complex consisting of the ATP synthase and photosystem I reaction center

Satarupa Bhaduri, Sandeep K Singh, [ ... ], William A. Cramer

Functional Equivalency Inferred from “Authoritative Sources” in Networks of Homologous Proteins

Shreedhar Natarajan, Eric Jakobsson

Predicting human protein subcellular localization by heterogeneous and comprehensive approaches

Chi-Hua Tung, Chi-Wei Chen, Han-Hao Sun, Yen-Wei Chu

An Artificial Functional Family Filter in Homolog Searching in Next-generation Sequencing Metagenomics

Ruofei Du, Donald Mercante, Zhide Fang

Extension of the viral ecology in humans using viral profile hidden Markov models

Zurab Bzhalava, Emilie Hultin, Joakim Dillner

Barcode Server: A Visualization-Based Genome Analysis System

Fenglou Mao, Victor Olman, Yan Wang, Ying Xu

Semantic Assembly and Annotation of Draft RNAseq Transcripts without a Reference Genome

Andrey Ptitsyn, Ramzi Temanni, Christelle Bouchard, Peter A. V. Anderson

Increasing Sequence Search Sensitivity with Transitive Alignments

Ketil Malde, Tomasz Furmanek

Proposal of Smith-Waterman algorithm on FPGA to accelerate the forward and backtracking steps

Fabio F. de Oliveira, Leonardo A. Dias, Marcelo A. C. Fernandes

A fast comparative genome browser for diverse bacteria and archaea

Morgan N. Price, Adam P. Arkin

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