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BLAST algorithm

Diversity Measures in Environmental Sequences Are Highly Dependent on Alignment Quality—Data from ITS and New LSU Primers Targeting Basidiomycetes

Dirk Krüger, Danuta Kapturska, Christiane Fischer, Rolf Daniel, Tesfaye Wubet

published 21 Feb 2012

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Genomic Position Mapping Discrepancies of Commercial SNP Chips

João Fadista, Christian Bendixen

published 17 Feb 2012

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Large-Scale Identification of Mirtrons in Arabidopsis and Rice

Yijun Meng, Chaogang Shao

published 13 Feb 2012

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DNA Barcoding of Recently Diverged Species: Relative Performance of Matching Methods

Robin van Velzen, Emanuel Weitschek, Giovanni Felici, Freek T. Bakker

published 17 Jan 2012

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Development of a DNA Barcoding System for Seagrasses: Successful but Not Simple

Christina Lucas, Thirunavakkarasu Thangaradjou, Jutta Papenbrock

published 11 Jan 2012

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Gentle Masking of Low-Complexity Sequences Improves Homology Search

Martin C. Frith

published 19 Dec 2011

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Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads

Li C. Xia, Jacob A. Cram, Ting Chen, Jed A. Fuhrman, Fengzhu Sun

published 06 Dec 2011

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Displacement of the Predominant Dengue Virus from Type 2 to Type 1 with a Subsequent Genotype Shift from IV to I in Surabaya, Indonesia 2008–2010

Atsushi Yamanaka, Kris C. Mulyatno, Helen Susilowati, Eryk Hendrianto, Amor P. Ginting, Dian D. Sary, Fedik A. Rantam, Soegeng Soegijanto, Eiji Konishi

published 07 Nov 2011

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Molecular Diversity of Fungal Phylotypes Co-Amplified Alongside Nematodes from Coastal and Deep-Sea Marine Environments

Punyasloke Bhadury, Holly Bik, John D. Lambshead, Melanie C. Austen, Gary R. Smerdon, Alex D. Rogers

published 26 Oct 2011

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Identification of Antigens Specific to Non-Tuberculous Mycobacteria: The Mce Family of Proteins as a Target of T Cell Immune Responses

Anna M. Checkley, David H. Wyllie, Thomas J. Scriba, Tanya Golubchik, Adrian V. S. Hill, Willem A. Hanekom, Helen McShane

published 25 Oct 2011

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Meraculous: De Novo Genome Assembly with Short Paired-End Reads

Jarrod A. Chapman, Isaac Ho, Sirisha Sunkara, Shujun Luo, Gary P. Schroth, Daniel S. Rokhsar

published 18 Aug 2011

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DNA Barcode Sequence Identification Incorporating Taxonomic Hierarchy and within Taxon Variability

Damon P. Little

published 16 Aug 2011

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The Barcode of Life Data Portal: Bridging the Biodiversity Informatics Divide for DNA Barcoding

Indra Neil Sarkar, Michael Trizna

published 27 Jul 2011

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