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BLAST algorithm

A Metastable Equilibrium Model for the Relative Abundances of Microbial Phyla in a Hot Spring

Jeffrey M. Dick, Everett L. Shock

De Novo Assembly and Characterization of the Transcriptome, and Development of SSR Markers in Wax Gourd (Benicasa hispida)

Biao Jiang, Dasen Xie, [ ... ], Xiaoming He

De Novo Assembly and Characterization of Two Transcriptomes Reveal Multiple Light-Mediated Functions in the Scallop Eye (Bivalvia: Pectinidae)

Autum N. Pairett, Jeanne M. Serb

The Plastid Genome of the Red Macroalga Grateloupia taiwanensis (Halymeniaceae)

Michael S. DePriest, Debashish Bhattacharya, Juan M. López-Bautista

TCW: Transcriptome Computational Workbench

Carol Soderlund, William Nelson, Mark Willer, David R. Gang

Resolving Prokaryotic Taxonomy without rRNA: Longer Oligonucleotide Word Lengths Improve Genome and Metagenome Taxonomic Classification

Eric B. Alsop, Jason Raymond

Serum Antibody Repertoire Profiling Using In Silico Antigen Screen

Xinyue Liu, Qiang Hu, [ ... ], Yurij Ionov

FFPred 2.0: Improved Homology-Independent Prediction of Gene Ontology Terms for Eukaryotic Protein Sequences

Federico Minneci, Damiano Piovesan, Domenico Cozzetto, David T. Jones

ExtremeDB: A Unified Web Repository of Extremophilic Archaea and Bacteria

Manash Chandra Majhi, Abhisek Kumar Behera, [ ... ], Anil Kumar

The PARIGA Server for Real Time Filtering and Analysis of Reciprocal BLAST Results

Massimiliano Orsini, Simone Carcangiu, [ ... ], Anna Tramontano

Developmental Gene Discovery in a Hemimetabolous Insect: De Novo Assembly and Annotation of a Transcriptome for the Cricket Gryllus bimaculatus

Victor Zeng, Ben Ewen-Campen, [ ... ], Cassandra G. Extavour

Hybrid Approach for Predicting Coreceptor Used by HIV-1 from Its V3 Loop Amino Acid Sequence

Ravi Kumar, Gajendra P. S. Raghava

Transcriptomic Study Reveals Widespread Spliced Leader Trans-Splicing, Short 5′-UTRs and Potential Complex Carbon Fixation Mechanisms in the Euglenoid Alga Eutreptiella sp.

Rita C. Kuo, Huan Zhang, [ ... ], Senjie Lin

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