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BLAST algorithm

Comparative Genome Analysis of Lactobacillus rhamnosus Clinical Isolates from Initial Stages of Dental Pulp Infection: Identification of a New Exopolysaccharide Cluster

Mangala A. Nadkarni, Zhiliang Chen, Marc R. Wilkins, Neil Hunter

Combining Transcriptome Assemblies from Multiple De Novo Assemblers in the Allo-Tetraploid Plant Nicotiana benthamiana

Kenlee Nakasugi, Ross Crowhurst, Julia Bally, Peter Waterhouse

Analysis of the Skin Transcriptome in Two Oujiang Color Varieties of Common Carp

Chenghui Wang, Michael Wachholtz, [ ... ], Guoqing Lu

RNA CoMPASS: A Dual Approach for Pathogen and Host Transcriptome Analysis of RNA-Seq Datasets

Guorong Xu, Michael J. Strong, [ ... ], Christopher M. Taylor

Transcriptomic Analysis of Endangered Chinese Salamander: Identification of Immune, Sex and Reproduction-Related Genes and Genetic Markers

Rongbo Che, Yuena Sun, Rixin Wang, Tianjun Xu

The Discovery of phiAGATE, A Novel Phage Infecting Bacillus pumilus, Leads to New Insights into the Phylogeny of the Subfamily Spounavirinae

Jakub Barylski, Grzegorz Nowicki, Anna Goździcka-Józefiak

Sequence Similarity of Clostridium difficile Strains by Analysis of Conserved Genes and Genome Content Is Reflected by Their Ribotype Affiliation

Hedwig Kurka, Armin Ehrenreich, [ ... ], Wolfgang Liebl

Functional and Evolutionary Characterization of the CONSTANS Gene Family in Short-Day Photoperiodic Flowering in Soybean

Faqiang Wu, Brian William Price, [ ... ], Yoshie Hanzawa

Prediction of Detailed Enzyme Functions and Identification of Specificity Determining Residues by Random Forests

Chioko Nagao, Nozomi Nagano, Kenji Mizuguchi

DNA Barcoding Reveals Limited Accuracy of Identifications Based on Folk Taxonomy

Hugo J. de Boer, Abderrahim Ouarghidi, [ ... ], Anneleen Kool

In Silico Prediction and In Vivo Validation of Daphnia pulex Micrornas

Shuai Chen, Garrett J. McKinney, Krista M. Nichols, Maria S. Sepúlveda

ClassyFlu: Classification of Influenza A Viruses with Discriminatively Trained Profile-HMMs

Sandra Van der Auwera, Ingo Bulla, [ ... ], Mario Stanke

De novo Sequencing, Characterization, and Comparison of Inflorescence Transcriptomes of Cornus canadensis and C. florida (Cornaceae)

Jian Zhang, Robert G. Franks, [ ... ], Qiu-Yun (Jenny) Xiang

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