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BLAST algorithm

Flexible, Fast and Accurate Sequence Alignment Profiling on GPGPU with PaSWAS

Sven Warris, Feyruz Yalcin, Katherine J. L. Jackson, Jan Peter Nap

published 01 Apr 2015

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The Elicitin-Like Glycoprotein, ELI025, Is Secreted by the Pathogenic Oomycete Pythium insidiosum and Evades Host Antibody Responses

Tassanee Lerksuthirat, Tassanee Lohnoo, Ruchuros Inkomlue, Thidarat Rujirawat, Wanta Yingyong, Rommanee Khositnithikul, Narumon Phaonakrop, Sittiruk Roytrakul, Thomas D. Sullivan, Theerapong Krajaejun

published 20 Mar 2015

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DNA Barcoding of Rhodiola (Crassulaceae): A Case Study on a Group of Recently Diversified Medicinal Plants from the Qinghai-Tibetan Plateau

Jian-Qiang Zhang, Shi-Yong Meng, Jun Wen, Guang-Yuan Rao

published 16 Mar 2015

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Deep mRNA Sequencing of the Tritonia diomedea Brain Transcriptome Provides Access to Gene Homologues for Neuronal Excitability, Synaptic Transmission and Peptidergic Signalling

Adriano Senatore, Neranjan Edirisinghe, Paul S. Katz

published 26 Feb 2015

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Whole Transcriptome Analysis Using Next-Generation Sequencing of Sterile-Cultured Eisenia andrei for Immune System Research

Yoshikazu Mikami, Atsushi Fukushima, Takao Kuwada-Kusunose, Tetsuya Sakurai, Taiichi Kitano, Yusuke Komiyama, Takashi Iwase, Kazuo Komiyama

published 23 Feb 2015

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CHOPER Filters Enable Rare Mutation Detection in Complex Mutagenesis Populations by Next-Generation Sequencing

Faezeh Salehi, Roberta Baronio, Ryan Idrogo-Lam, Huy Vu, Linda V. Hall, Peter Kaiser, Richard H. Lathrop

published 18 Feb 2015

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Exploring the Interaction of SV2A with Racetams Using Homology Modelling, Molecular Dynamics and Site-Directed Mutagenesis

Joanna Lee, Veronique Daniels, Zara A. Sands, Florence Lebon, Jiye Shi, Philip C. Biggin

published 18 Feb 2015

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Metabarcoding Is Powerful yet Still Blind: A Comparative Analysis of Morphological and Molecular Surveys of Seagrass Communities

Dominique A. Cowart, Miguel Pinheiro, Olivier Mouchel, Marion Maguer, Jacques Grall, Jacques Miné, Sophie Arnaud-Haond

published 10 Feb 2015

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16S Classifier: A Tool for Fast and Accurate Taxonomic Classification of 16S rRNA Hypervariable Regions in Metagenomic Datasets

Nikhil Chaudhary, Ashok K. Sharma, Piyush Agarwal, Ankit Gupta, Vineet K. Sharma

published 03 Feb 2015

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A Novel Mini-DNA Barcoding Assay to Identify Processed Fins from Internationally Protected Shark Species

Andrew T. Fields, Debra L. Abercrombie, Rowena Eng, Kevin Feldheim, Demian D. Chapman

published 03 Feb 2015

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Div-BLAST: Diversification of Sequence Search Results

Elif Eser, Tolga Can, Hakan Ferhatosmanoğlu

published 22 Dec 2014

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Diverse and Widespread Contamination Evident in the Unmapped Depths of High Throughput Sequencing Data

Richard W. Lusk

published 29 Oct 2014

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Transcriptome Sequencing and Analysis of Leaf Tissue of Avicennia marina Using the Illumina Platform

Jianzi Huang, Xiang Lu, Wanke Zhang, Rongfeng Huang, Shouyi Chen, Yizhi Zheng

published 29 Sep 2014

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