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Bacterial taxonomy

Bacterial diversity and composition on the rinds of specific melon cultivars and hybrids from across different growing regions in the United States

Madison Goforth, Victoria Obergh, [ ... ], Kerry K. Cooper

Gradients of bacteria in the oceanic water column reveal finely-resolved vertical distributions

Rachel C. Harbeitner, Fabian Wittmers, [ ... ], Alexandra Z. Worden

Diversity and plant growth promoting ability of rice root-associated bacteria in Burkina-Faso and cross-comparison with metabarcoding data

Moussa Sondo, Issa Wonni, [ ... ], Agnieszka Klonowska

Quantification of diversity sampling bias resulting from rice root bacterial isolation on popular and nitrogen-free culture media using 16S amplicon barcoding

Moussa Sondo, Issa Wonni, [ ... ], Lionel Moulin

Multi-amplicon microbiome data analysis pipelines for mixed orientation sequences using QIIME2: Assessing reference database, variable region and pre-processing bias in classification of mock bacterial community samples

Katherine A. Maki, Brian Wolff, [ ... ], Jennifer J. Barb

Effects of different amoxicillin treatment durations on microbiome diversity and composition in the gut

Katrine Lekang, Sudhanshu Shekhar, [ ... ], Hanne C. Winther-Larsen

A taxonomically representative strain collection to explore xenobiotic and secondary metabolism in bacteria

Evanthia Kontomina, Vasiliki Garefalaki, [ ... ], Sotiria Boukouvala

Development of an efficient antimicrobial susceptibility testing method with species identification by Nanopore sequencing of 16S rRNA amplicons

Yuto Kawai, Naoya Ozawa, [ ... ], Kazuki Mikata

NGS read classification using AI

Benjamin Voigt, Oliver Fischer, [ ... ], Piotr Wojciech Dabrowski

Ubiquitous flocculation activity and flocculation production basis of the conglutination mud from Ruditapes philippinarum along the coast of China

Jun Mu, Yuxia Wang, Xia Cui, Qiao Yang

Bacterial diversity dynamics in microbial consortia selected for lignin utilization

Isis Viana Mendes, Mariana Botelho Garcia, [ ... ], Betania Ferraz Quirino

Predictive functional analysis reveals inferred features unique to cervicovaginal microbiota of African women with bacterial vaginosis and high-risk human papillomavirus infection

Harris Onywera, Joseph Anejo-Okopi, [ ... ], Anna-Lise Williamson

Gut bacterial communities across 12 Ensifera (Orthoptera) at different feeding habits and its prediction for the insect with contrasting feeding habits

Xiang Zheng, Qidi Zhu, [ ... ], Fuming Shi

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