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Bacterial taxonomy

Multi-amplicon microbiome data analysis pipelines for mixed orientation sequences using QIIME2: Assessing reference database, variable region and pre-processing bias in classification of mock bacterial community samples

Katherine A. Maki, Brian Wolff, [ ... ], Jennifer J. Barb

A taxonomically representative strain collection to explore xenobiotic and secondary metabolism in bacteria

Evanthia Kontomina, Vasiliki Garefalaki, [ ... ], Sotiria Boukouvala

Development of an efficient antimicrobial susceptibility testing method with species identification by Nanopore sequencing of 16S rRNA amplicons

Yuto Kawai, Naoya Ozawa, [ ... ], Kazuki Mikata

NGS read classification using AI

Benjamin Voigt, Oliver Fischer, [ ... ], Piotr Wojciech Dabrowski

Ubiquitous flocculation activity and flocculation production basis of the conglutination mud from Ruditapes philippinarum along the coast of China

Jun Mu, Yuxia Wang, Xia Cui, Qiao Yang

Bacterial diversity dynamics in microbial consortia selected for lignin utilization

Isis Viana Mendes, Mariana Botelho Garcia, [ ... ], Betania Ferraz Quirino

Predictive functional analysis reveals inferred features unique to cervicovaginal microbiota of African women with bacterial vaginosis and high-risk human papillomavirus infection

Harris Onywera, Joseph Anejo-Okopi, [ ... ], Anna-Lise Williamson

Gut bacterial communities across 12 Ensifera (Orthoptera) at different feeding habits and its prediction for the insect with contrasting feeding habits

Xiang Zheng, Qidi Zhu, [ ... ], Fuming Shi

Soil bacterial communities and their associated functions for forest restoration on a limestone mine in northern Thailand

Chakriya Sansupa, Witoon Purahong, [ ... ], Terd Disayathanoowat

Metagenomic analysis exploring taxonomic and functional diversity of bacterial communities of a Himalayan urban fresh water lake

Tawseef Ahmad, Gaganjot Gupta, [ ... ], Mohammed Nasser Alyemeni

Wastewater treatment works change the intestinal microbiomes of insectivorous bats

Calvin Mehl, M. Corrie Schoeman, [ ... ], Dalene Vosloo

Diversity of bacteria populations associated with different thallus regions of the brown alga Laminaria digitata

Maureen W. Ihua, Jamie A. FitzGerald, [ ... ], Alan D. W. Dobson

Spatio-temporal variations in bacterial and fungal community associated with dust aerosol in Kuwait

Fadila Al Salameen, Nazima Habibi, [ ... ], Faiz Shirshikhar

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