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Bacterial genetics

An insight into the genome-wide analysis of bacterial defense mechanisms in a uropathogenic Morganella morganii isolate from Bangladesh

Syed Muktadir Al Sium, Barna Goswami, Sanjana Fatema Chowdhury, Showti Raheel Naser, Mihir Kanti Sarkar, Md. Jobaid Faruq, Md. Ahashan Habib, Shahina Akter, Tanjina Akhtar Banu, Md. Murshed Hasan Sarkar, Md. Salim Khan

published 23 Jan 2025

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Genomic insights into the probiotic potential and genes linked to gallic acid metabolism in Pediococcus pentosaceus MBBL6 isolated from healthy cow milk

Md. Morshedur Rahman, Naim Siddique, Soharth Hasnat, Md. Tanvir Rahman, Mustafizur Rahman, Munirul Alam, Ziban Chandra Das, Tofazzal Islam, M. Nazmul Hoque

published 26 Dec 2024

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Prediction of antimicrobial resistance of Klebsiella pneumoniae from genomic data through machine learning

Chiara Condorelli, Emanuele Nicitra, Nicolò Musso, Dafne Bongiorno, Stefania Stefani, Lucia Valentina Gambuzza, Vincenza Carchiolo, Mattia Frasca

published 18 Sep 2024

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Whole genome-based reclassification of several species of the genus Microbispora

Noureddine Bouras, Ricardo A. R. Machado

published 22 Aug 2024

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A comparative genomic study of a hydrocarbon-degrading marine bacterial consortium

Jorge Rojas-Vargas, Eria A. Rebollar, Alejandro Sanchez-Flores, Liliana Pardo-López

published 08 Aug 2024

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Pangenome and genomic signatures linked to the dominance of the lineage-4 of Mycobacterium tuberculosis isolated from extrapulmonary tuberculosis patients in western Ethiopia

Basha Chekesa, Harinder Singh, Norberto Gonzalez-Juarbe, Sanjay Vashee, Rosana Wiscovitch-Russo, Christopher L. Dupont, Musse Girma, Oudessa Kerro, Balako Gumi, Gobena Ameni

published 25 Jul 2024

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Comparative genomics of Tn6411 transposons carrying the bla_IMP-1 gene in Pseudomonas aeruginosa

Lin Zheng, Zixian Wang, Jingyi Guo, Jiayao Guan, Gejin Lu, Jie Jing, Shiwen Sun, Yang Sun, Xue Ji, Bowen Jiang, Yongjie Wang, Chuanfang Zhao, Lingwei Zhu, Xuejun Guo

published 09 Jul 2024

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Evaluation of a multiplex-qPCR for paediatric pleural empyema—An observational study in hospitalised children

Jonathan Jacobson, Loraine Fabri, Joshua Osowicki, Shivanthan Shanthikumar, Anna-Maria Costa, Belinda Ortika, Ashleigh Wee-Hee, Michelle Pragassen, Cassandra Gatt, Gena Gonis, Cattram Nguyen, Thomas Rozen, Warwick Teague, Jim Buttery, Vanessa Clifford, Kim Mulholland, Andrew Steer, Sarath Ranganathan, Andrew Daley, Eileen Dunne, Catherine Satzke

published 25 Jun 2024

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Molecular basis of the persistence of chloramphenicol resistance among Escherichia coli and Salmonella spp. from pigs, pork and humans in Thailand

Jiratchaya Puangseree, Rangsiya Prathan, Songsak Srisanga, Rungtip Chuanchuen

published 24 May 2024

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Investigating the degradation potential of microbial consortia for perfluorooctane sulfonate through a functional "top-down" screening approach

Yu Liang, Anzhou Ma

published 17 May 2024

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First detection and characterization of mcr-1 colistin resistant E. coli from wild rat in Bangladesh

Md. Wohab Ali, Susmita Karmakar, Kishor Sosmith Utsho, Ajran Kabir, Mohammad Arif, Md. Shafiqul Islam, Md. Tanvir Rahman, Jayedul Hassan

published 14 May 2024

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Comprehensive analysis of genomic variation, pan-genome and biosynthetic potential of Corynebacterium glutamicum strains

Md. Shahedur Rahman, Md. Ebrahim Khalil Shimul, Md. Anowar Khasru Parvez

published 08 May 2024

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Shotgun metagenomic analysis of saliva microbiome suggests Mogibacterium as a factor associated with chronic bacterial osteomyelitis

Hiroko Yahara, Souichi Yanamoto, Miho Takahashi, Yuji Hamada, Takuya Asaka, Yoshimasa Kitagawa, Kuniyasu Moridera, Kazuma Noguchi, Yutaka Maruoka, Koji Yahara

published 06 May 2024

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