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Applied mathematics

Protein Sequence Alignment Analysis by Local Covariation: Coevolution Statistics Detect Benchmark Alignment Errors

Russell J. Dickson, Gregory B. Gloor

Accelerating the Gillespie τ-Leaping Method Using Graphics Processing Units

Ivan Komarov, Roshan M. D’Souza, Jose-Juan Tapia

Imbalanced Multi-Modal Multi-Label Learning for Subcellular Localization Prediction of Human Proteins with Both Single and Multiple Sites

Jianjun He, Hong Gu, Wenqi Liu

Optimal Resource Allocation to Survival and Reproduction in Parasitic Wasps Foraging in Fragmented Habitats

Eric Wajnberg, Patrick Coquillard, Louise E. M. Vet, Thomas Hoffmeister

Protein-Protein Interaction Site Predictions with Three-Dimensional Probability Distributions of Interacting Atoms on Protein Surfaces

Ching-Tai Chen, Hung-Pin Peng, [ ... ], An-Suei Yang

Probing Real Sensory Worlds of Receivers with Unsupervised Clustering

Michael Pfeiffer, Manfred Hartbauer, [ ... ], Heinrich Römer

Hierarchical Ordering of Reticular Networks

Yuriy Mileyko, Herbert Edelsbrunner, Charles A. Price, Joshua S. Weitz

Visualization of Genomic Changes by Segmented Smoothing Using an L₀ Penalty

Ralph C. A. Rippe, Jacqueline J. Meulman, Paul H. C. Eilers

Application of Approximate Pattern Matching in Two Dimensional Spaces to Grid Layout for Biochemical Network Maps

Kentaro Inoue, Shinichi Shimozono, Hideaki Yoshida, Hiroyuki Kurata

An Efficient Rank Based Approach for Closest String and Closest Substring

Liviu P. Dinu, Radu Ionescu

FunFOLDQA: A Quality Assessment Tool for Protein-Ligand Binding Site Residue Predictions

Daniel B. Roche, Maria T. Buenavista, Liam J. McGuffin

Gaussian Mixture Model of Heart Rate Variability

Tommaso Costa, Giuseppe Boccignone, Mario Ferraro

PepMapper: A Collaborative Web Tool for Mapping Epitopes from Affinity-Selected Peptides

Wenhan Chen, William W. Guo, Yanxin Huang, Zhiqiang Ma

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