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Algorithms

GPS-CCD: A Novel Computational Program for the Prediction of Calpain Cleavage Sites

Zexian Liu, Jun Cao, [ ... ], Yu Xue

Tradeoff between Biomass and Flavonoid Accumulation in White Clover Reflects Contrasting Plant Strategies

Rainer W. Hofmann, M. Z. Zulfiqhar Jahufer

Evaluating Ortholog Prediction Algorithms in a Yeast Model Clade

Leonidas Salichos, Antonis Rokas

A Topological Framework for the Computation of the HOMFLY Polynomial and Its Application to Proteins

Federico Comoglio, Maurizio Rinaldi

Prediction of Antimicrobial Peptides Based on Sequence Alignment and Feature Selection Methods

Ping Wang, Lele Hu, [ ... ], Kuo-Chen Chou

MartiTracks: A Geometrical Approach for Identifying Geographical Patterns of Distribution

Susy Echeverría-Londoño, Daniel Rafael Miranda-Esquivel

Dual Testing Algorithm of BED-CEIA and AxSYM Avidity Index Assays Performs Best in Identifying Recent HIV Infection in a Sample of Rwandan Sex Workers

Sarah L. Braunstein, Denis Nash, [ ... ], Janneke H. H. M. van de Wijgert

Multilevel Compression of Random Walks on Networks Reveals Hierarchical Organization in Large Integrated Systems

Martin Rosvall, Carl T. Bergstrom

Computational Bacterial Genome-Wide Analysis of Phylogenetic Profiles Reveals Potential Virulence Genes of Streptococcus agalactiae

Frank Po-Yen Lin, Ruiting Lan, [ ... ], Enrico Coiera

Weight Trimming and Propensity Score Weighting

Brian K. Lee, Justin Lessler, Elizabeth A. Stuart

A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

Julie D. Thompson, Benjamin Linard, Odile Lecompte, Olivier Poch

Predicting Phenotypic Severity of Uncertain Gene Variants in the RET Proto-Oncogene

David K. Crockett, Stephen R. Piccolo, [ ... ], Joyce A. Mitchell

Determination of Baroreflex Sensitivity during the Modified Oxford Maneuver by Trigonometric Regressive Spectral Analysis

Julia Gasch, Manja Reimann, [ ... ], Tjalf Ziemssen

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