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Improving the field accuracy of a malaria diagnostic algorithm combining sequential interpretation of rapid diagnostic test detecting PfHRP2 and pLDH in febrile children in a seasonal hyperendemic malaria transmission area in Burkina Faso

  • Diane Yirgnur Some,

    Roles Data curation, Formal analysis, Investigation, Project administration, Supervision, Writing – original draft, Writing – review & editing

    Affiliations Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso, Université Joseph Ki-Zerbo Ouaga 1, Unité de Recherche et de Formation en Sciences de la Vie et de la Terre (UFR-SVT), Ouagadougou, Burkina Faso

  • Francois Kiemde ,

    Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Validation, Visualization, Writing – original draft, Writing – review & editing

    kiemdefrancois@yahoo.fr, francois.kiemde@crun.bf

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Berenger Kabore,

    Roles Conceptualization, Data curation, Investigation, Supervision, Validation, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Daniel Valia,

    Roles Conceptualization, Formal analysis, Investigation, Methodology, Project administration, Supervision, Validation, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Toussaint Rouamba,

    Roles Formal analysis, Methodology, Validation, Visualization, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Seydou Sawadogo,

    Roles Data curation, Software, Supervision, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Athanase M. Some,

    Roles Project administration, Resources, Supervision, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Hermann Sorgho,

    Roles Supervision, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Macaire Nana,

    Roles Project administration, Supervision, Validation, Writing – review & editing

    Affiliation Health District of Nanoro, Ministry of Health, Nanoro, Burkina Faso

  • Yacouba Nombre,

    Roles Project administration, Supervision, Writing – review & editing

    Affiliation National Malaria Control Program, Ministry of Health, Ouagadougou, Burkina Faso

  • Nadine A. Kone,

    Roles Project administration, Supervision, Validation, Visualization, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Adelaide Compaore,

    Roles Supervision, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Fadima Yaya Bocoum,

    Roles Conceptualization, Project administration, Supervision, Visualization, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Massa dit Achille Bonko,

    Roles Project administration, Supervision, Validation, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Georges Some,

    Roles Data curation, Formal analysis, Investigation, Supervision, Writing – review & editing

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

  • Gautier Tougri,

    Roles Supervision, Writing – review & editing

    Affiliation National Malaria Control Program, Ministry of Health, Ouagadougou, Burkina Faso

  • Sylvie Yeri Youl,

    Roles Supervision, Writing – review & editing

    Affiliation National Agency for Primary Healthcare, Ministry of Health, Ouagadougou, Burkina Faso

  • Konseibo Noellie,

    Roles Supervision, Writing – review & editing

    Affiliation National Agency for Primary Healthcare, Ministry of Health, Ouagadougou, Burkina Faso

  • Yeri Esther Hien,

    Roles Supervision, Writing – review & editing

    Affiliation Université Joseph Ki-Zerbo Ouaga 1, Unité de Recherche et de Formation en Sciences de la Vie et de la Terre (UFR-SVT), Ouagadougou, Burkina Faso

  • Aly Savadogo,

    Roles Supervision, Writing – review & editing

    Affiliation Université Joseph Ki-Zerbo Ouaga 1, Unité de Recherche et de Formation en Sciences de la Vie et de la Terre (UFR-SVT), Ouagadougou, Burkina Faso

  • Fla Koueta,

    Roles Data curation, Investigation, Methodology, Supervision, Validation, Writing – review & editing

    Affiliation Department of Pediatrics, CHU Yalgado Ouedraogo, Ouagadougou, Burkina Faso

  • Henk D. F. H. Schallig ,

    Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

    ☯ These two authors contributed equally to this work.

    Affiliations Department of Medical Microbiology and Infection Prevention, Laboratory for Experimental Parasitology, Amsterdam University Medical Centre, Amsterdam, The Netherlands, Amsterdam institute for Immunology and Infectious Diseases, Amsterdam, The Netherlands, Amsterdam Institute for Global Health and Development, Amsterdam, The Netherlands

  •  [ ... ],
  • Halidou Tinto

    Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Writing – original draft, Writing – review & editing

    ☯ These two authors contributed equally to this work.

    Affiliation Institut de Recherche en Sciences de la Santé - Clinical Research Unit Of Nanoro (IRSS-CRUN), Ouagadougou, Burkina Faso

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Abstract

Objective

To evaluate the field accuracy of a malaria diagnostic algorithm combining sequential interpretation of two-step malaria RDT detecting PfHRP2 and pLDH with information on previous antimalarial treatments within the past four weeks for the diagnosis of malaria in febrile children under 5 years compared to standard diagnosis using a PfHRP2 only based RDT.

Methods

Febrile children aged 6–59 months attending outpatient clinics were randomized to either the control group, which received the standard RDT (PfHRP2 only), or the intervention groups (an e-algorithm or a decisional algorithm), which was subjected to the diagnostic algorithm combining an RDT detecting PfHRP2 and pLDH with information on previous antimalarial treatment. Malaria diagnosis with PfHRP2-based RDT was reported as positive or negative. The sequential interpretation was reported as (i) positive when the pLDH line appeared, regardless of the PfHRP2 results, (ii) negative when both lines did not appear and (iii) undetermined when only the PfHRP2 line appeared, and information on previous antimalarial treatment within the past 4 weeks was used as a decision-support tool to classify active malaria from past infection. Blood samples were also collected for expert microscopy as the gold standard, and for qPCR to further evaluate undeterminate results and potential false-positive RDT outcomes.

Results

In total 1176 children were included, with 66.7% (784/1176) assigned to the intervention arms and 33.3% (392/1176) to the control arm. In patients assigned to the sequential algorithm, the number of undetermined cases was 12.7% (100/784). Considering microscopy as the gold standard, PfHRP2-based RDT reported a sensitivity of 96.5% and a of specificity 79.1%, with positive and negative predictive values of 78.3% and 96.7%, respectively. For the sequential algorithm, the sensitivity, specificity, positive and negative predictive values of the conclusive-only results (i.e., PfHRP2±/pLDH+ and PfHRP2-/pLDH-) were 97.4%, 98.4%, 98.0% and 97.9%. However, when undetermined result were combined with conclusive results, the sensitivity, specificity, positive and negative predictive values were 89.7%, 96.8%, 95.6% and 92.4% respectively. Among recently antimalarial treated participants in sequential algorithm arm, 59.5% (50/84) were qPCR-positive, compared to 68.7% (11/16) qPCR-positivity in those without recent treatment.

Conclusions

The sequential diagnostic approach improves the diagnosis of malaria in a real world setting, compared to the use of PfHRP2-(only) based RDT. However, relying only on history of antimalarial treatment in undetermined cases may decrease algorithm’s sensitivity, which could result in missing active or recurrent malaria infections.

Introduction

Malaria rapid diagnostic tests (RDT) are essential tools in the management of febrile diseases in resource-limited settings without routine microscopy [1]. Malaria RDTs are simple, affordable, rapid and easy to perform by non-technicians and do not require sophisticated laboratory infrastructure, making them widely available to front-line healthcare workers at the point-of-care and allowing for timely treatment decisions [2]. However, the effective use of malaria RDTs in routine health systems is hindered due to their limitations, such as the persistence of Plasmodium falciparum histidine rich protein-2 (PfHRR2) antigen up to four weeks after successful treatment and the low sensitivity of Plasmodium Lactate Dehydrogenase (pLDH) -based tests [3]. These limitations can result in misdiagnosis of the real cause of fever [4].

To overcome this issue, a diagnostic algorithm combining sequential interpretation of PfHRP2/pLDH RDT with information on previous antimalarial treatment within the past two weeks has previously been proposed [5]. The findings of this study demonstrated that this sequential approach significantly reduced the rate of incorrect diagnoses among febrile children compared to the single PfHRP2-based RDT. The positive predictive value was improved (90% for the sequential interpretation versus 84% for PfHRP2 antigen), highlighting the diagnostic benefit of the sequential diagnostic approach in the context of high malaria transmission.. While the advantages of combining PfHRP2 and pLDH in sequential interpretations to diagnose malaria were obvious, the challenge remained to differentiate malaria cases in patients with undetermined results; i.e., cases with PfHRP2 + /pLDH- results. These results are either due to persisting PfHRP2 antigen after successful antimalarial treatment, or the low sensitivity of the pLDH-based RDT [5]. In the previous study, information on prior antimalarial treatment within the past two weeks was used as a decision-support tool to classify active malaria infection from past infection in patients with undetermined (PfHRP2 + /pLDH-) results [1,4,6]. It allowed for thedetection of a portion of false-positive results (mainly) due to the PfHRP2 antigen persistence. In light of these findings, we hypothesize that including information on prior antimalarial treatment within the past four weeks will further increase the diagnostic accuracy [4,79].

This diagnostic approach was evaluated within a three-arm randomized controlled trial designed to improve the management of febrile illnesses and address antimicrobial resistance. Two intervention arms comprising: 1) the e-algorithm which is managing participants using the enhanced diagnostic algorithm integrating PfHRP2/pLDH results with information on previous antimalarial treatment (diagnostic and treatment are guided by designed clinical electronic descision support platform), and 2) the decisional algoritm arm in which participants are managed according to the predefined diagnostic decision framework without electronic integration (diagnostic and treatment are left to the discretion of the healthcare workers). The control arm comprised routine care practices and uses a single-step PfHRP2 RDT as diagnostic test [10]. The purpose of the present study was to assess the accuracy of a malaria diagnosis approach tested combining sequential interpretation of two-step RDTs detecting PfHRP2 and pLDH in children under 5 years compared to routine RDT detecting PfHRP2.

Methods

Study design

A prospective, comparative, randomized controlled trial with 3-arms (2 intervention arms, which include i) an e-algorithm or ii)a decisional algorithm, and 1 control arm [standard practise]), was conducted from 4 March 2022–28 February 2023 at the outpatient clinic of Bologho in the health district of Nanoro (Burkina Faso). The aim of the study was to evaluate the algorithm combining two-step RDT detecting PfHRP2/pLDH compared to single PfHRP2-based RDT for the diagnosis of malaria in febrile children [10]. Briefly, all children aged 6–59 months attending the health facility with axillary temperature ≥37.5°C or history of fever within the past 7 days were eligible. Written informed consent was obtained from the parents/guardians prior to any data or clinical sample collection. Participants were randomised either to the control arm, which followed the routine care pathway including PfHRP2-based RDT or to one of the two intervention arms, in which the participants were subjected to an enhanced diagnostic package including the sequential interpretation combining the two-step RDT detecting PfHRP2/pLDH and information on previous antimalarial treatment within the past 4 weeks (i.e., e-Algorithm and decisional algorithm described in Fig 1). Fingerprick capillary blood (around 200 µL) was collected in a microtube EDTA for microscopy and dried blood spot (DBS) preparation on Whatman 3 filter paper for qPCR testing to further assess undetermined results and false-positive RDT results.

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Fig 1. Proposed sequential algorithm workflow combining the two-step malaria RDT detecting PfHRP2/pLDH and information on previous antimalarial treatment within the past 4 weeks: Judgement of malaria infection in undetermined cases: 1: Yes = no antimalarial treatment (no malaria)m 2: No=antimalaria treatment (malaria).

https://doi.org/10.1371/journal.pone.0351990.g001

Malaria case management in the study area followed the Burkinabe national guidelines aligned with World Health Organization (WHO) recommendations, including parasitological confirmation by microscopy or RDTs prior to treatment, and the use of artemisinin-based combination therapies (ACTs) as first-line treatment for uncomplicated malaria. At the time of the study, available data indicated that the prevalence of pfhrp2/pfhrp3 gene deletions in the study area was below the 5% threshold recommended by WHO for reconsideration of PfHRP2-based RDT use [11,12].

Laboratory procedures

Malaria rapid diagnostic test.

The PfHRP2-based RDT (SD Bioline Pf: Standard Diagnostic, Hagal-Dong, Republic of Korea and the two-step (double band) malaria RDT (SD Bioline® Malaria Ag Pf/Pan batches 05EDG063A, 05EDG030A: Standard Diagnostics, Hagal-Dong, Republic of Korea), were performed at primary health centers by trained nurses. For both tests, five (5) μl of capillary blood sample was used.

The results of the PfHRP2-based RDT were recorded as positive or negative.

To evaluate the accuracy of the proposed algorithm combining PfHRP2 and pLDH, with information on previous antimalarial treatment within the past four weeks, the diagnostic results of the PfHRP2 and pLDH antigens were recorded followed by previous antimalarial treatment results when undetermined. The interpretation of the two-step RDT detecting PfHRP2 and pLDH was based on local epidemiology and done as follows (Fig 1):

  • PfHRP2(+)/pLDH(+): when both lines appeared in the test, the malaria diagnosis is considered positive to falciparum malaria or a possible co-infection with non-falciparum malaria;
  • PfHRP2(-)/pLDH(+): when only pLDH line appeared, the malaria diagnosis is considered as positive and more likely indicate a non-falciparum malaria infection or falciparum malaria with a potential hrp2 gene deletion;
  • PfHRP2(-)/pLDH(-): when no line appeared, malaria results is negative
  • PfHRP2(+)/pLDH(-):when only the PfHRP2 line appeared, malaria test result is undetermined and information on previous antimalarial treatment was used as a decision-support tool to classify malaria infection:
    • If previous antimalarial treatment is reported within the past 4 weeks (< 28 days), the malaria diagnosis was reported as negative. Nonetheless, for ethical considerations, the antimalarial treatment decision was based on malaria microscopy.
    • If previous antimalarial treatment is not reported within the past 4 weeks (< 28 days), the malaria diagnosis was reported as positive and antimalarial was prescribed.

The workflow of the proposed sequential algorithm is summarized in Fig 1.

All malaria RDT results (i.e., single PfHRP2-based RDT and the sequential algorithm) were independently read by 2 trained nurses. A third reader was requested in case of disagreement.

Microscopy.

Malaria diagnosis by microscopy (double reading) was done by expert microscopists at Clinical Research Unit of Nanoro (CRUN) who are subjected to regular external quality control (National Institute of Communicable Diseases/World Health Organization; NICD/WHO). All expert microscopists are certified WHO Level 1, ensuring high level of proficiency and adherence to international quality standard. Thick and thin blood smears were performed in duplicate from EDTA blood samples for each participant, air-dried and stained with 10% Giemsa solution for 20 minutes. Malaria parasitemia was expressed as parasites/μl of blood and calculated by counting the number of asexual parasites per 200 leukocytes (if the count was > 10 asexual parasites) and by 500 leukocytes (if the count was < 10 asexual parasites), assuming a leukocyte count of 8000 per μL of blood. In case of a discrepant result, a third reading was performed. Discrepancy involves positive versus negative, differences in Plasmodium species, or differences in parasite density (i.e., the difference between two-readings exceeding 50% of the lower reading).

DNA extraction and VarATS quantitative PCR.

The qPCR test was performed in case of discrepancy in results between the RDTs (sequential diagnosis and routine RDT) and microscopy, and undetermined results to two-steps malaria RDT. Briefly, malaria parasite DNA (deoxyribonucleic acid) was extracted from DBS using QIAamp DNA mini kit® (Qiagen, Germany) and stored at -20oC until the qPCR test was done. A volume of five (5) µL of DNA were used as template for qPCR analysis targeting P. falciparum var gene acidic terminal sequence (varATS, ≈ 59 copies per genome) as previously described [13]. The qPCR was run on StepOnePlus (Applied Biosystems™). The parasite densities were obtained by interpolating cycle thresholds (Ct) using a standard curve prepared with titrated samples (100,000–0.1 parasites/μL). The limit of detection of the varATS-based qPCR was 0.4 parasite/μL for DNA extracted from filter paper. Samples with Ct value >38.0 were considered as negative. Stored DNA of P. falciparum with a known parasitemia was used as positive control. The negative controls included human negative blood spots on filter paper and master mix reagents used as no template control (NTC).

Data collection and analysis

Data were collected using electronic Case Report Forms (e-CRFs) built on Android Studio and then uploaded to a secured server hosted and managed by CRUN. Data were extracted in Excel format, cleaned and analysed using STATA software version 17 (StataCorp. Stata Statistical Software: Release 17. College Station, TX: StataCorp LLC; 2021). Qualitative and quantitative variables were described respectively by their frequencies with 95% confidence intervals and by their medians with interquartile ranges. Diagnostic accuracy of the sequential algorithm and the PfHRP2-based RDT was evaluated by calculating their sensitivity, specificity, positive predictive value and negative predictive value using microscopy as the gold standard. Parasite densities were expressed by geometric mean. The level of agreement between the sequential algorithm and microscopy was evaluated by the Cohen’s Kappa values. Standard classification suggested by McHugh [14] has been used to interprete kappa values. A significance threshold of α = 5% was used for all analyses.

Results

Baseline clinical and socio-demographic characteristics of the study population

From 4 March 2022–28 February 2023, 1176 children aged 6–59 months were enrolled. Of these patients enrolled, 784 (66.7%) were tested with the sequential algorithm (i.e., 394 and 390 in the decisonal algorithm and e-algorithm arms, respectively) and 392 (33.3%) with PfHRP2-based RDT only as recommended by the local standard routine care. Mono-infections with Plasmodium falciparum (P.falciparum) were found by expert microscopy in 97.7% (514/526) of participants. The participants’ clinical and socio-demographic features are detailed in Table 1.

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Table 1. Baseline characteristics of the study population in decisionnel, e-algorithm and control arm (standard routine care).

https://doi.org/10.1371/journal.pone.0351990.t001

Diagnostic accuracy of the sequential interpretation or routine PfHRP2 compared to microscopy

Table 2 summarizes the results of the sequantial diagnostic approaches and routine PfHRP2 test, compared to expert microscopy (gold standard). The sequential diagnosis identified 87.3% (684/784) of conclusive cases (PfHRP2 + /pLDH + , PfHRP2-/pLDH + , or PfHRP2-/pLDH-) and 12.7% (100/784) yielded undetermined (PfHRP2 + /pLDH-) results were classified as “undetermined”. The results of PfHRP2-/pLDH+ were interpreted as potential non-falciparum malaria or P. falciparum infection with possible hrp2 deletion, consistent with the algorithm characteristics of the two-step malaria RDT used. However, microscopy identified non-falciparum infections in only a small number of cases (12/526), and molecular testing was limited to P. falciparum-specific varATS qPCR. As a result, non-falciparum or mixed-species infections could not be molecularly confirmed in this study.

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Table 2. Comparison of the sequential algorithm (decisional and e-algorithm arm) and PfHRP2 results according to the Plasmodium falciparum density.

https://doi.org/10.1371/journal.pone.0351990.t002

Among the participants of both intervention arms with a positive sequential diagnosis (PfHRP2 + /pLDH+), 98.0% (298/304) were positive by expert microscopy, compared to 78.3% (166/212) who were found positive by routine RDT (PfHRP2+) testing in the control arm. In the intervention arms, 16 cases out of the 100 who had an undetermined sequential diagnosis results did not report previous antimalarial treatment within the past 4 weeks. Half of those (8 cases) were found positive by expert microscopy.

Among participants of both intervention arms with a negative sequential diagnosis (PfHRP2-/pLDH-), 97.8% (372/380) were negative by expert microscopy, compared to 96.7% (174/180) found negative with routine RDT (PfHRP2-) of the control arm. Of the 84.0% (84/100) of undetermined sequential diagnosis of both intervention arms who reported an antimalarial treatment within the past 4 weeks, 67.9% (57/84) were negative by expert microscopy. Moreover, 74.3% (26/35) of participant with undetermined diagnostic results had a parasite density below 1,001/µl.

Accuracy of sequential algorithm and routine PfHRP2 compared to expert microscopy

Table 3 summarizes the diagnostic accuracy of the sequential algorithm of PfHRP2/pLDH combined with information on previous antimalarial treatments and routine PfHRP2 tests, compared to expert microscopy as gold standard.

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Table 3. Accuracy of PfHRP2-RDT and sequential algorithm compared to microscopy (gold standard).

https://doi.org/10.1371/journal.pone.0351990.t003

Among the participants with conclusive-only results with sequential algorithm (PfHRP2 + /pLDH+ and PfHRP2-/pLDH-), false positive and false negative rates were 1.2% (8/684) and 0.9% (6/684), respectively. When including cases with initially undetermined diagnostic results that required information on previous antimalarial treatment within the past 4 weeks to confirm malaria status, the overall false positive and false negative rates increased to 1.8% (14/784) and 4.4% (35/784), respectively. In comparison, the routine PfHRP2 RDT in the control arm yielded 11.8% (46/392) false-positive and 1.6% (6/392) false-negative results.

Diagnostic performance of the sequential algorithm and PfHRP2 with microscopy (gold standard)

The diagnostic accuracy of the sequential algorithm and routine PfHRP2 results compared to expert microscopy (gold standard) are presented in Table 4.

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Table 4. Diagnostic performance of sequential algorithm and PfHRP2-RDT with microscopy (gold standard).

https://doi.org/10.1371/journal.pone.0351990.t004

When the analysis of the sequential diagnostic algorithm was restricted to conclusive results only, sensitivity, specificity, positive predictive value (PPV) and negative predictive values (NPV) were 97.4%, 98.4%, 98.0%, and 97.9%, respectively. However, when undetermined cases were resolved using information on prior antimalarial treatment and included in the analysis, the overall sensitivity decreased to 89.7% while specificity was 96.8%. In comparison, the routine PfHRP2 RDT showed lower specificity (79.1%) and PPV (78.3%), despite comparable sensitivity (96.5%).

To evaluate the impact of seasonality (rainy and dry season) on diagnostic performance, PPV and NPV were stratified by high and low transmission periods (Table 5). As expected, both PPV and NPV varied across seasons, reflecting the prevalence-dependent nature of these metrics. For example, PPV (99.5%) was higher during the peak transmission season (rainy season), while NPV (95.7%) remained high during low transmission season (dry season). These findings indicate that performance estimates for the diagnostic algorithm are context-dependent and may shift with local transmission intensity and seasonal epidemiology.

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Table 5. Diagnostic accuracy of PfHRP2 versus sequential algorithm by season.

https://doi.org/10.1371/journal.pone.0351990.t005

The agreement between sequential algorithm and expert microscopy was considered to be “very good”; kappa value = 0.871 (95% CI = 0.836–0.906; SE of kappa = 0.035). The agreement between routine PfHRP2 and expert microscopy as gold standard was considered “Good”; Kappa value = 0.737 (95% CI = 0.687–0.786; SE of kappa = 0.049).

Analysis on discrepancy and undetermined samples

Among false-positive results to routine PfHRP2 RDT, 41.3% (19/46) were confirmed positive by qPCR. In comparison, 50% (7/14) of false positive from the sequential interpretation algorithm combined with information on previous antimalarial treatment within the past 4 weeks were qPCR-positive.

Among participants with undetermined diagnostic results from the sequential diagnostic algorithm, qPCR detected P. falciparum DNA in 61.0% (61/100) of cases. Of undetermined cases who reported previous antimalarial treatment within the past 4 weeks, 59.5% (50/84) were qPCR-positive compared to 68.7% (11/16) of qPCR-positive in those without recent treatment.

Discussion

The study found that several participants who tested positive for malaria with RDT based on the detection of only PfHRP2 were actually not infected with P. falciparum when expert microscopy was used as gold standard. The specificity issue of PfHRP2 reported in the study has been documented in several other studies, leading to an overestimation of malaria cases and overlooking the real causes of fever in the event of false positive results for malaria [3,6,9,1517]. However, the results of the sequential diagnosis of malaria, combining the two-band RDT detecting PfHRP2 and pLDH, allowed for differentiating between true and false diagnostic results, which could not be diagnosed with single malaria RDT, and classified them in two distinct groups: conclusive-only results (with a diagnostic accuracy over 97%), and undetermined results for which an additional diagnostic investigation is required. The classification of diagnostic results into these two groups allowed healthcare workers to take an appropriate treatment decision for 87% of patients and avoided unnecessary use of antimalarials and subsequently antibiotics. However, the proportion of undetermined (PfHRP2 + /pLDH-) results observed in this study is clinically relevant and reflects known limitations of antigen-based diagnostics in settings of recent treatment, low parasite density, or recrudescence/reinfection. While exclusion of undetermined results yields high diagnostic performance, inclusion of these cases, resolved using treatment history, results in a meaningful reduction in sensitivity, highlighting a trade-off between conclusive classification and the risk of missed active infections. The relative improvements of malaria diagnosis by the use of information of prior antimalarial treatment can be failed by drug resistance [18,19].

The duration of previous antimalarial treatment may appear to be sufficiently extensive for parents or guardians to accurately recall. Since failing to treat sick people could result in ongoing disease transmission, false negative results are quite concerning. The “undetermined” (PfHRP2 + /pLDH-) category reflects well-recognised biological and analytical limitations of pLDH-based rapid diagnostic tests, which exhibit reduced sensitivity at low parasite densities compared with PfHRP2-based assays [1,20]. In high-transmission settings, this category may also include cases of recent Plasmodium reinfection or persistent PfHRP2 antigen following prior antimalarial treatment, highlighting the operational challenges of interpreting these results [18,19]. Consequently, this category includes true infections characterized by low parasitaemia as well as cases with persistent PfHRP2 antigen following recent treatment. Consistent with this interpretation, a substantial proportion of undetermined cases occurred in lower parasite density strata, and many children in this group remained qPCR-positive. qPCR was not considered as the reference test in this study, because it may detect a sub-microscopic infection (reflecting asymptomatic carriage rather than clinical symptoms). Therefore, qPCR-positive/microscopy negative discrepant cases should be interpreted with caution, as qPCR may detect low-density parasitemia or residual parasite DNA following recent infection or treatment [21]. These observations indicate that resolving undetermined results solely based on information on previous treatment, including seasonal malaria chemoprevention (SMC) is inherently limited and may lead to misclassification of low-density, recrudescent, or reinfection cases. Althought SMC is implemented in the study area in accordance with national policy during periods of high transmission (July to October), information on prior antimalarial treatment, including potential participation in SMC, was collected by interviewing thecaregivers. This represents an important limitation of the proposed diagnostic approach and underscores the need for cautious interpretation or the use of more accurate diagnostics that can be feasibly implemented in remote settings. Additionally, the PfHRP2-/pLDH+ pattern is commonly used to suggest a possible non-falciparum malaria or P. falciparum infection with potential hrp2 gene deletion. However, the present study was not designed to robustly evaluate these scenarios. Non-falciparum infections were rarely detected by microscopy, and molecular testing relied on a P. falciparum-specific assay, precluding confirmation of non-falciparum or mixed-species infections. In line with WHO guidance, such results should therefore be considered indicative rather than confirmatory, particularly in settings where species distribution is uncertain or mixed infections may occur.. This study also reported a discrepancy between microscopy and qPCR results among patients with undetermined results who reported recent antimalarial treatment. This finding may be explained by the higher analytical sensitivity of qPCR, which can detect low parasite density or residual parasite DNA following a (successful) antimalarial treatment, whereas microscopy has a higher detection threshold and may yield negative results in such cases [22,23].

The performance of a diagnostic test depends on the number of incorrect results [24]. In this study, the routine RDT showed a higher sensitivity (>95%) for the detection of the P. falciparum parasite than the sequential diagnostic algorithm (<90%). However, the sequential diagnosis showed a higher specificity (>95%) in the detection of P. falciparum parasites. This may be due to the inaccurate data on previous antimalarial treatments reported by caregivers [5]. Indeed, the previous antimalarial treatments collected in this study were those prescribed by a health professional at healthcare centers, and those received during the seasonal malaria chemoprevention (SMC) campaign during the period of high transmission. Unfortunately, the clinical team did not have any evidence that the previous treatments were supplied and provided correctly. While the results of the routinely used PfHRP2 RDT are similar to those reported by Kiemde et al. in 2019, the results of the sequential diagnosis are different [5]. These differences observed for the sequential diagnosis could be explained by the SMC campaign during the study period, and the duration of previous treatment collected (4 weeks in the present study versus 2 weeks in the 2019 study). Given the proportion of participants requiring confirmation of malaria infection (approximately 13%), the sequential diagnosis could be used to quickly triage real malaria cases. However, failing to treat sick people among undetermined cases could result in ongoing disease transmission due to false negative results in this group. In this study, confirmation of undetermined cases based solely on prior antimalarial treatment demonstrated clear limitations.

It would be necessary to confirm the diagnosis of malaria in undetermined cases with a more efficient test that could be deployed in rural areas. In this study, qPCR was not used as a reference test, given the fact that submicroscopic infection can be detected, which may not correlate with observed clinical symptoms [6]. In contrast to our initial hypothesis, which stated that using information on previous treatment would have allowed us to better distinguish low-grade parasitaemia from the persistence of the PfHRP2 antigen, we discovered that approximately 60% of children who reported previous antimalarial treatment had a positive qPCR. These findings differ from those reported in our previous study and by Maltha et al. [5,6] This could be explained by poor medication delivery during health center consultations and chemoprevention bulk antimalarial distribution (administration not monitored) or a wrong report on previous antimalarial treatment, as no resistance to the antimalarials administered was detected in our research area [25]. Furthermore, our findings indicate that the sequential algorithm included undetermined results corrected yielded a higher false-negative rate than the PfHRP2-based RDT. This represents a limitation of the proposed algorithm, as undetermined cases are classified based on information about prior antimalarial treatment without dispensing, adherence, and timing confirmed, misclassification cannot be excluded. The delay of treatment in false negative cases may lead to disease progression and contribute to the continued transmission of malaria.

PPV and NPV are inherently dependent on the prevalence of infection and therefore vary with seasonal transmission intensity and local epidemiology. Our stratified analysis demonstrates that PPV is higher during peak transmission periods and lower during low transmission periods, and vice versa for NPV. Accordingly, claims of improved predictive values should be interpreted within the specific epidemiological context of this study rather than as universally generalisable. These findings highlight the importance of considering seasonality and transmission dynamics when applying or interpreting algorithm-based malaria diagnostics in different settings.

Conclusion

This study confirms the usefulness of the sequential algorithm for enhancing specificity and facilitating cases stratification of clinical malaria in endemic areas. However, using the history of antimalarial treatment within the past four weeks as a decision-support tool for the classification of undetermined cases in endemic settings introduces a limitation as it may decrease the sensitivity of the algorithm. A more efficient (diagnostic) tool, suitable for deployment in rural areas, would be necessary to confirm malaria in these situations.

Acknowledgments

We are grateful to the study staff of the rural health facility of Bologho, in the Health District of Nanoro, for their contributions to the work. We are also thankful to the study participants and parents/caregivers for taking part in this research.

References

  1. 1. Hawkes M, Conroy AL, Opoka RO, Namasopo S, Liles WC, John CC, et al. Use of a three-band HRP2/pLDH combination rapid diagnostic test increases diagnostic specificity for falciparum malaria in Ugandan children. Malar J. 2014;13:43. pmid:24484540
  2. 2. Mukkala AN, Kwan J, Lau R, Harris D, Kain D, Boggild AK. An Update on Malaria Rapid Diagnostic Tests. Curr Infect Dis Rep. 2018;20:1–8.
  3. 3. Dalrymple U, Arambepola R, Gething PW, Cameron E. How long do rapid diagnostic tests remain positive after anti ‑ malarial treatment?. Malar J. 2018;1–13.
  4. 4. Kiemde F, Bonko MDA, Tahita MC, Lompo P, Rouamba T, Tinto H, et al. Accuracy of a Plasmodium falciparum specific histidine-rich protein 2 rapid diagnostic test in the context of the presence of non-malaria fevers, prior anti-malarial use and seasonal malaria transmission. Malar J. 2017;16(1):294. pmid:28728558
  5. 5. Kiemde F, Bonko MDA, Tahita MC, Mens PF, Tinto H, Schallig HDFH, et al. Algorithms for sequential interpretation of a malaria rapid diagnostic test detecting two different targets of Plasmodium species to improve diagnostic accuracy in a rural setting (Nanoro, Burkina Faso). PLoS One. 2019;14(2):e0211801. pmid:30759130
  6. 6. Maltha J, Guiraud I, Lompo P, Kaboré B, Gillet P, Van Geet C, et al. Accuracy of PfHRP2 versus Pf-pLDH antigen detection by malaria rapid diagnostic tests in hospitalized children in a seasonal hyperendemic malaria transmission area in Burkina Faso. Malar J. 2014;13:20. pmid:24418119
  7. 7. Hosch S, Yoboue CA, Donfack OT, Guirou EA, Dangy J-P, Mpina M, et al. Analysis of nucleic acids extracted from rapid diagnostic tests reveals a significant proportion of false positive test results associated with recent malaria treatment. Malar J. 2022;21(1):23. pmid:35073934
  8. 8. Nyunt MH, Kyaw MP, Win KK, Myint KM, Nyunt KM. Field evaluation of HRP2 and pan pLDH-based immunochromatographic assay in therapeutic monitoring of uncomplicated falciparum malaria in Myanmar. Malar J. 2013;12:123. pmid:23577630
  9. 9. Kyabayinze DJ, Tibenderana JK, Odong GW, Rwakimari JB, Counihan H. Operational accuracy and comparative persistent antigenicity of HRP2 rapid diagnostic tests for Plasmodium falciparum malaria in a hyperendemic region of Uganda. Malar J. 2008;7:221. pmid:18959777
  10. 10. Kiemde F, Compaore A, Koueta F, Some AM, Kabore B, Valia D, et al. Development and evaluation of an electronic algorithm using a combination of a two-step malaria RDT and other rapid diagnostic tools for the management of febrile illness in children under 5 attending outpatient facilities in Burkina Faso. Trials. 2022;23(1):779. pmid:36109766
  11. 11. Tarama CW, Soré H, Siribié M, Débé S, Kinda R, Nonkani WG, et al. Assessing the histidine-rich protein 2/3 gene deletion in Plasmodium falciparum isolates from Burkina Faso. Malar J. 2023;22(1):363. pmid:38017455
  12. 12. Molina-de la Fuente I, Tahita MC, Bérenger K, Ta Tang TH, García L, González V, et al. Malaria diagnosis challenges and pfhrp2 and pfhrp3 gene deletions using pregnant women as sentinel population in Nanoro region, Burkina Faso. Pathog Glob Health. 2024;118(6):481–91. pmid:39140699
  13. 13. Hofmann N, Mwingira F, Shekalaghe S, Robinson LJ, Mueller I, Felger I. Ultra-sensitive detection of Plasmodium falciparum by amplification of multi-copy subtelomeric targets. PLoS Med. 2015;12(3):e1001788. pmid:25734259
  14. 14. McHugh ML. Lessons in biostatistics interrater reliability: the kappa statistic. Biochem Medica. 2012;22(3):276–82.
  15. 15. Bonko MDA, Tahita MC, Kiemde F, Lompo P, Mens PF, Tinto H, et al. Diagnostic Performance of Plasmodium falciparum Histidine-Rich Protein-2 Antigen-Specific Rapid Diagnostic Test in Children at the Peripheral Health Care Level in Nanoro (Burkina Faso). Trop Med Infect Dis. 2022;7(12):440. pmid:36548695
  16. 16. Natama HM, Traoré TE, Rouamba T, Somé MA, Zango SH, Rovira-Vallbona E, et al. Performance of PfHRP2-RDT for malaria diagnosis during the first year of life in a high malaria transmission area in Burkina Faso. J Parasit Dis. 2023;47(2):280–9. pmid:37193494
  17. 17. Kiemde F, Tahita MC, Bonko MDA, Mens PF, Tinto H, van Hensbroek MB, et al. Implementation of a malaria rapid diagnostic test in a rural setting of Nanoro, Burkina Faso: from expectation to reality. Malar J. 2018;17(1):316. pmid:30165849
  18. 18. Gansane A, Tarama C, Lingani M, Debe S, Tiendrebeogo F, Kinda R. Efficacy of artemether ‑ lumefantrine, dihydroartemisinin ‑ piperaquine, and artesunate ‑ pyronaridine for the treatment of uncomplicated Plasmodium falciparum malaria in Burkina Faso, 2020 – 2021. Malar J. 2026.
  19. 19. Lingani M, Bonkian LN, Yerbanga I, Kazienga A, Valéa I, Sorgho H, et al. In vivo/ex vivo efficacy of artemether-lumefantrine and artesunate-amodiaquine as first-line treatment for uncomplicated falciparum malaria in children: an open label randomized controlled trial in Burkina Faso. Malar J. 2020;19(1):8. pmid:31906948
  20. 20. Gatton ML, Rees-Channer RR, Glenn J, Barnwell JW, Cheng Q, Chiodini PL, et al. Pan-Plasmodium band sensitivity for Plasmodium falciparum detection in combination malaria rapid diagnostic tests and implications for clinical management. Malar J. 2015;14:115. pmid:25889624
  21. 21. World Health Organization. Disease surveillance for malaria elimination: an operational manual. Geneva: WHO. 2013.
  22. 22. Amir A, Cheong F-W, De Silva JR, Lau Y-L. Diagnostic tools in childhood malaria. Parasit Vectors. 2018;11(1):53. pmid:29361963
  23. 23. Beshir KB, Sutherland CJ, Sawa P, Drakeley CJ, Okell L, Mweresa CK, et al. Residual Plasmodium falciparum parasitemia in Kenyan children after artemisinin-combination therapy is associated with increased transmission to mosquitoes and parasite recurrence. J Infect Dis. 2013;208(12):2017–24. pmid:23945376
  24. 24. Zeleke MT, Gelaye KA, Hirpa AA, Teshome MB, Guma GT, Abate BT, et al. Diagnostic performance of PfHRP2/pLDH malaria rapid diagnostic tests in elimination setting, northwest Ethiopia. PLOS Glob Public Health. 2023;3(7):e0001879. pmid:37428720
  25. 25. Rasmussen C, Ringwald P. Is there evidence of anti ‑ malarial multidrug resistance in Burkina Faso?. Malar J. 2021;20(320):1–5.