Figures
Abstract
Bone collagen of terrestrial and marine animals (n = 218) recovered from Ottoman period contexts at Aqaba Castle, Jordan (16th–19th centuries CE), were analyzed for δ13C, δ15N, and δ2H isotope ratios. While δ13C and δ15N values showed considerable overlap among species in the hyperarid environment, δ2H values exhibited less overlap, enhancing stable isotopic niche differentiation. In domesticates, δ2H values show trophic enrichments of +18.4‰ from herbivores to omnivores (dogs), and +26‰ to cats which had the highest δ2H values. Fish δ2H values show a positive relationship with increasing trophic level but also moderately correlate with body size (r = 0.61, R2 = 0.37). The offset between collagen δ2H and rainfall (δ2Hmw) values is smaller for camels (−1.4‰), sheep (−4.5‰), and goats (+6.8%), than for chickens (−18.5‰) and cattle (−27.0‰) due to more frequent consumption of 2H-depleted groundwater by the latter species, because of their higher water requirements. Similarities between local precipitation and bone collagen δ2H values for most terrestrial herbivores suggest the utility of δ2H values for geographic provenancing. This is explored by overlapping gazelle and chukar collagen δ2H values over a regional δ2Hmw isoscape, tentatively suggesting these species inhabited the water-stressed highland environments surrounding Aqaba Castle. This study demonstrates the advantages of incorporating bone collagen δ2H values alongside δ13C and δ15N values as a useful environmental proxy, enhancing interpretations of animal dietary behaviour, trophic levels, water sources, and wild animal home ranges.
Citation: Shev GT, De Cupere B, Brozou A, Fuller BT, Mannino MA, Peters J, et al. (2025) Non-exchangeable hydrogen (δ2H) stable isotope ratios in fauna provide enhanced dietary, isotopic niche and home range reconstruction at Aqaba Castle, Jordan. PLoS One 20(8): e0328991. https://doi.org/10.1371/journal.pone.0328991
Editor: Dorothée Drucker, Senckenberg Gesellschaft fur Naturforschung, GERMANY
Received: March 12, 2025; Accepted: July 9, 2025; Published: August 1, 2025
Copyright: © 2025 Shev et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Data Availability: The datasets generated or analyzed during the current study are available in the Supporting information file published with this manuscript.
Funding: Claudio Ottoni received funding from European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (project FELIX, grant agreement no. 101002811) The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Competing interests: The authors declare that no competing interests exist.
Introduction
While stable isotope ratios of carbon (δ13C) and nitrogen (δ15N) in bone collagen are widely used to reconstruct dietary patterns at archaeological sites [1,2], dietary interpretations based on these two proxies can be hampered by confounding factors (S1 Note in S1 File). Examples include dietary stress influencing consumer values [3,4], and environmental factors such as aridity affecting stable isotopic baselines [5–7] leading to overlapping stable isotope values among organisms. Non-exchangeable hydrogen isotope ratios (δ2Hne, hereafter referred to as δ2H) are an additional proxy that have potential to help disentangle unresolved overlaps in stable isotopic niches [8–14]. Previous studies illustrated a relationship between increasing animal tissue δ2H values and higher trophic levels [9,10,15]. Additionally, δ2H values have demonstrated utility for tracking animal migration [16–18] owing to correlations between tissue δ2H values of lower trophic species and locally available water [19–22]. These properties make δ2H values a valuable tool for reconstructing diets, provenance, and palaeoenvironment. To date only a handful of archaeological studies have made use of δ2H values [8,10,13–15,23–25] and their scientific potential for studying past human-animal interactions is not yet fully realised.
Here we analyse bone collagen δ13C, δ15N and δ2H isotope ratios of terrestrial and marine taxa recovered from Ottoman period (16th - 19th centuries CE) contexts at Aqaba Castle (29.5217° N, 35.0020° S) in Jordan (Fig 1). This was an important fortification that protected trading and pilgrimage routes passing through the Gulf of Aqaba [26] (Note S2 in S1 File). The present study has accrued the largest multi-isotopic dataset incorporating δ2H values for south-western Asia, providing stable isotopic baselines both for the hyperarid environment of Aqaba and the region in general. In total, 220 bone samples were selected from wild and domesticated animals, and locally caught fish. Domesticated cats (Felis catus), the most abundant sample (n = 20), stand out for their notably high δ2H values. We examine collagen-collagen Δ2H value trophic discrimination factors (TDF), and how these differ between taxa. As δ2H values reflect both diet and trophic level (bionomic factors), as well as environment conditions (scenopoetic factors), we incorporate δ2H values in determining the stable isotopic niche spaces of terrestrial animals as a proxy for ecological niche [27–29]. Finally, we investigate the relationship between meteoric water (δ2Hmw) and herbivore bone collagen δ2H values to establish the geographic home ranges of wild gazelles (Gazella spp.) and chukars (Alectoris chukar).
Contours at 500m elevations. Generated in QGIS (v.3.34.13) using Shuttle Radar Topography Mission (SRTMGL3) elevation data from NASA’s Land Processes Distributed Active Archive Center (LP DAAC), Natural Earth vector datasets, and elevation-derived contour lines generated from the SRTM raster. All datasets are in the public domain and suitable for reuse in CC BY 4.0 licensed publications with appropriate attribution.
Non-exchangeable hydrogen stable isotope ratios (δ2H) in ecology and archaeology
Bone collagen contains hydrogen (H) in two forms: non-exchangeable hydrogen, which is covalently bound to carbon in bone collagen, and exchangeable hydrogen, which readily exchanges with atmospheric hydrogen [30]. To ensure accurate stable isotopic measurements laboratory protocols are designed to distinguish exchangeable from non-exchangeable H [30–32]. Previous studies have shown that non-exchangeable H can account for ~75–83% of the total H in bone collagen [9,10,12,13,33,34], although fractions of exchangeable H are typically lower in protocols using non-gelatinised collagen [22].
Bone collagen δ2H values can complement δ15N ratio measurements, offering improved resolution for trophic level determination [9,10,14,15,23]. This is in part because the atomic mass difference between 2H and lighter 1H is two-fold, and is 14 times greater than between 15N and 14N (= + 7.1%) [14]. The mechanisms influencing 2H-trophic enrichment remain poorly understood [9,10,12,35,36], although some assumptions can be made. Previous studies have shown that terrestrial herbivores tend to have the lowest δ2H values closer to baseline locally available water δ2H values, increasing by +30 to +50‰ from herbivores to omnivores, while carnivores are + 10 to +20‰ more enriched [9,10,12]. 2H-enrichment in carnivores may relate to the incorporation of essential amino acids, the preferential use of 2H-depleted amino acids metabolically, or the integration of 2H-enriched body water during amino acid synthesis [12].
A recent feeding study on rats and guinea pigs demonstrated that δ2H diet-tissue offsets (in muscle or dentine collagen) differed according to dietary composition and species [37]. Using the same water sources of known isotopic composition in order to solely test diet-collagen fractionation, these animals consumed lipid-containing plant-, meat-, or insect-based diets [37]. The average non-lipid diet-tissue enrichments for both species combined for plant-based diets was δ2H + 35 ± 7.5‰ (n = 5), for insect-based diets δ2H + 40 ± 7.1‰ (n = 5), and meat-based diets δ2H + 25 ± 13.4% (n = 9) [37]. The study determined moderate differences between species in their δ2H diet-tissue fractionation, but larger differences within species between tissue type and type of diet [37].
Due to the lengthy trophic chains of marine systems, δ2H values have proved useful for resolving marine food consumption [15,23,25,38]. Van der Sluis et al. [25] incorporated prehistoric human bone collagen δ2H values from Denmark into a Bayesian dietary mixing model, finding that marine fish consumption contributed to higher δ2H values in Mesolithic and Viking Age humans. Although δ2H values of marine animals are generally high, which facilitates their use for determining marine food consumption [12,25], the trophic level of the species analysed is a significant factor. For example, low trophic level herbivorous fish, such as parrotfish (Sparisoma cretense) which primarily feed on algae [39], can have relatively low δ2H values [15].
Plant tissues tend to be 2H-depleted compared to water sources, although this varies with environmental conditions [40,41]. In arid environments, xerophytic and halophytic plants exhibit stem values approximately 3–9‰ lower than soil water [42]. Additionally, plant organs vary in offset values, for example, in the semi-arid adapted Peperomia congesta from Peru, stem-leaf offset may exceed +10‰ due to evapotranspiration [43]. Study of soil water δ2H in the Negev desert determined that soil water δ2H values were on average around 20‰ lower than local rainwater values [44]. A trophic enrichment from consumed plants that are relatively 2H-depleted compared to rainfall, and influence of local drinking water sources, mean that herbivore bone collagen δ2H values often align with local water values [9,19,22].
The correlation between animal tissue δ2H and local water δ2H values indicates its potential for investigating ecological home range or migrations, although its effectiveness is taxa-dependent [21,22,45]. Pietsch and colleagues [21] assessed the hair δ2H and oxygen (δ18O) values of North American pumas (Puma concolor), American bobcats (Lynx rufus), white-tailed deer (Odocoileus virginianus), and rabbits (Sylvilagus floridanus). While they found little to no linear correlation between the δ2H values of predatory cat hair and local river water isoscape values (L. rufus R2 = 0.01; P. concolor R2 = 0.04), strong linear correlations existed between local water and hair δ2H values of the two herbivores (O. virginianus R2 = 0.87; S. floridanus R2 = 0.81). Additionally, several ecological studies have examined bird migrations by relating the δ2H values of feathers against regional δ2Hmw isoscapes [16–18,31]. These findings underscore that δ2H values in herbivores and birds are helpful for studying provenance and migrations in ecological studies.
Tissues with rapid growth, like hair and feathers, may better reflect local water sources, though some studies have also explored links between meteoric water and bone collagen δ2H values [12,22,35]. Topalov et al. [12] examined bone collagen δ2H values of 22 modern terrestrial and marine vertebrates across the United States. They found a moderate correlation (R2 = 0.55) between bone collagen δ2H and δ2Hmw values across all species but confirmed generally higher variances in the δ2H values of carnivores. Reynard et al. [22] studied the spatial relationship between δ2Hmw isoscapes and animal bone collagen from Bronze and Iron Age site across the Mediterranean, demonstrating significant correlations. Cattle values were more strongly correlated with δ2Hmw values than ovicaprids, perhaps due to differences relating to water needs and body size [22,45]. However, the use of bone collagen δ2H values for studying the provenance of terrestrial herbivores has so far received little attention.
Hydrogen isotope fractionation along with dietary and water intake influence on bone collagen δ2H may vary considerably between taxa. A dietary study on mice found that approximately 80% of non-exchangeable 2H-enrichment in bone collagen was derived from food, and 17% from water, although these percentages likely differ for omnivorous and carnivorous animals, and small species with fast metabolisms [35]. Other studies found drinking water to influence on average 40% of bone collagen non-exchangeable H [10,46]. Although food sources are likely the main influence on bone collagen δ2H [47], for obligate drinkers, water source δ2H values should more prominently influence their tissue values [9]. Some carnivorous taxa, for example felids, are unable to synthesise amino acids such as taurine and arginine in vivo. As essential amino acids and much of their moisture requirements are acquired from their prey, drinking water likely has much less influence on bone collagen δ2H values [21]. These findings emphasise the need to consider diet, water sources, and physiology when interpreting δ2H values across taxa.
Materials and methods
Archaeological investigation at Aqaba Castle
Excavations at Aqaba Castle were undertaken as part of the ‘Aqaba Castle Project’ between 2000–2003 by the Ministère de la Région Wallonne, and between 2005–2008 by Ghent University, Belgium (S2 Note in S1 File). Archaeological investigation revealed underlying structures and materials dating back to the Early Islamic (7th – 12th centuries CE) period. This includes water wells that served as irrigation water used in the fields to the east and west of the site. The current surviving structure was constructed in the early 16th century CE by the Mamluks, with occasional renovations occurring during the Ottoman period until its final abandonment in the early 20th century CE [26].
Animal remains were studied in the field as part of the ‘Aqaba Castle Project’ during the 2005 and 2008 excavation seasons. All fish remains and other fauna from the 2006 and 2007 seasons were exported and analysed at the Royal Belgian Institute of Natural Sciences, Brussels, Belgium. Faunal material dates from the Roman period until the early 20th century, with most finds (69%) dating to the Mamluk (13th - 16th centuries) and Ottoman (16th - 19th centuries) periods collectively. Finds were almost entirely hand collected, and although this was done with care, it is likely that many smaller faunal remains were not recovered [48].
The most common taxon recovered from Aqaba Castle are domestic species including sheep (Ovis aries), goats (Capra hircus), chickens (Gallus gallus domesticus), and camels (Camelus sp.), as well as marine fish and shellfish. Examined fish are coastal or reef dwelling with some exceptions. For example, jacks (Carangidae), which due to their estimated standard lengths (SL) (mainly > 50 cm) were presumably caught offshore from pelagic environments. Most species were likely caught locally in the Gulf of Aqaba or to the south in the Red Sea [48]. Four main families dominate the ichthyofauna: parrotfish (Scaridae), emperor bream (Lethrinidae), groupers (Serranidae), and jacks. Domesticated sheep and goats were the most numerous terrestrial animals, followed by camels. Other domesticates include donkeys (Equus asinus), cats, dogs (Canis familiaris), and in fewer numbers, cattle (Bos sp.) and horses (Equus caballus). Wild mammals included gazelles (Gazella spp.), cape hares (Lepus capensis), rock hyraxes (Procavia capensis) and striped hyenas, whose bones notably display butchery marks suggesting their consumption by humans. Chickens account for around 50% of all identified bird remains. The most represented wild birds were Egyptian vultures (Neophron percnopterus), ravens (Corvus corax), and chukars (Alectoris chukar) [48]. No human remains were available for analysis.
The environment surrounding Aqaba is hyperarid and it is situated at the southern terminus of the Wadi Arabah, part of the Syro-African Rift Valley roughly corresponding to the lowlands between the Dead Sea and Red Sea [49], and is surrounded by the Sinai to the west, the Negev to the north, and the Hisma deserts to the east and southeast. The average annual temperature at Aqaba (Aqaba Airport station, OJAQ) is 22.1°C, and temperatures often exceed 35°C during the summer period. Aqaba receives a mean annual precipitation of 30 mm, with all precipitation generally occurring during the winter months of December and January [50]. Precipitation occurs sporadically and single events can sometimes account for 100% of annual rainfall, therefore the ephemeral watercourses found in Wadi Arabah are periodically subject to flash flooding [51].
Vegetation within the Wadi Arabah varies according to topography and accessibility to groundwater. Towards the south of the wadi where Aqaba is located, groundwater is found close to the surface. Common species of plants include acacia trees (Acacia sp.), desert-adapted halophytes such as Haloxylon salicornicum, and salt-tolerant xerophytes such as Anabasis articulata and Salsola sp. [49,52,53]. Of these, Haloxylon sp., Anabasis articulata, and many species of the Salsola genus have C4-photosynthetic pathways [54]. C4 plants are commonplace throughout the region, with approximately 160 species being native to Jordan [55].
Bone samples from Aqaba Castle
All animal bone samples from Aqaba Castle analysed in this study are housed at the Royal Belgian Institute of Natural Sciences, Brussels. No permits were required for the described study, which complied with all relevant regulations. A total of 220 animal bones from the Ottoman period (16th - 19th centuries AD) were selected for collagen extraction (S1 and S2 Tables in S1 File). Fish samples (n = 89) include emperors (Lethrinidae, n = 15), groupers (Serranidae, n = 15), jacks (Carangidae, n = 15), mullets (Mugilidae, n = 5), two genera of parrotfish (Cetoscarus sp. n = 4; Scarus sp. n = 9), snappers (Lutjanidae, n = 10), soldier bream (Agygrops sp., n = 10), triggerfish (Balistidae, n = 4) and wrasses (Labridae, n = 2). Domestic animals (n = 89) include camels (n = 10), cats (n = 20), cattle (n = 10), chickens (n = 13), dogs (n = 8), donkeys (n = 3), goats (n = 14) and sheep (n = 11). Wild terrestrial animals (n = 42) include chukars (n = 3), gazelles (n = 10), hares (n = 9), hyenas (n = 10) and ravens (n = 10). Of the 20 cats sampled, 18 date to the Ottoman period and two to the Mamluk period (13th - 16th centuries).
Collagen extraction
Collagen was extracted at the Moesgaard Archaeo-Science Laboratory (MOS) at Aarhus University, Denmark, and the Royal Institute for Cultural Heritage (RICH), Belgium. Whole bone pieces were demineralised in 0.5 M HCl at 4°C. Poorly preserved specimens were demineralised in 0.25 M HCl. Samples were then gelatinised with 0.01 M HCl (pH ~ 3) at 65°C for 48 hours. 9mL Ezee-FilterTM Separators were used to filter out the collagen from any remaining pollutants. Purified collagen was then frozen at −30°C overnight prior to lyophilisation for 48 hours.
Samples that did not conform to quality control indicators (>1% collagen yield after extraction; and elemental concentrations of carbon >13.8% and nitrogen >4%, and atomic C:N ratios between 2.9 to 3.6) [56,57] were re-extracted from remaining bone and underwent ultrafiltration with Amicon UltraCentrifigual Filters (30 kDa MWCO) prior to gelatinization, following the protocol of Brown [58]. Collagen from fish samples that failed to meet quality control criteria was re-extracted and treated with 0.1 M NaOH prior to gelatinisation. Although NaOH treatment can reduce collagen yields by several percent, it is generally unnecessary unless there is evidence of humic acid contamination, such as dark discolouration [59]. Due to their porous structure, fish bones were considered more susceptible to humic contamination than those of other taxa, and were therefore treated with NaOH. Comparative studies on well-preserved bones suggest that the inclusion or omission of NaOH treatment yields similar %C and %N values [60].
Samples that were extracted in Brussels follow a procedure outlined by Wojcieszak [61]. Between 0.5 to 1g of bone sample was crushed into pieces a few millimetres in length. Samples were dimineralised in 2.4 M HCl for 15 minutes and EzeeTM syringe filters (60–90 µm pore) were used to remove the solution. To remove humic and other contaminants 0.25 M NaOH solution was inserted for 15 minutes prior to repetition of the rinsing step. Samples were again resubmerged in lower concentration HCl (0.3 M) to remove atmospheric CO2. After rinsing, bone was left in an oven in pH3 HCl solution at 90°C for 10 hours, prior to 24 hours of lyophilisation.
Mass spectrometry and isotopic standards
Carbon and nitrogen stable isotope ratios were measured at the Department of Earth and Environmental Sciences, KU Leuven, Belgium using a Thermo Flash HT/EA Elemental Analyzer linked to a Thermo Delta V Advantage IRMS and ConFlo IV interface (Thermo Scientific). Data was calibrated against an international standard sample (caffeine IAEA-600: δ13C −27.8‰, δ15N 1.0‰), and two inhouse standards, Pacific Tuna muscle (δ13C −18.0‰, δ15N 15.8‰) and leucine (δ13C 13.7‰, δ15N 13.8‰) that were calibrated against certified standards. These calibration standards were measured at regular intervals during each run, and the standard deviations of these defined the analytical error as <0.08‰ for δ15N and <0.11‰ for δ13C. Non-exchangeable hydrogen isotope ratios were determined at the Department of Earth and Environmental Sciences, KU Leuven, Belgium, on a Thermo Flash HT/EA equipped with a Uniprep autosampler for water vapor equilibration [32], coupled to a Thermo Delta V Advantage IRMS. Bone collagen (⁓0.3–0.4 mg) was weighed in duplicate into silver capsules. We followed a dual equilibration approach, by weighing all samples in duplicate and equilibrating each batch with either 2H-depleted or 2H-enriched water vapour of known isotope composition (−247.1‰ and +829.4‰, respectively). This allows calculation of the fraction of exchangeable H in each sample, and to calculate δ2H values based on mass balance, as described by Wassenaar and Hobson [62]. Conversion to H2 was accomplished with a reduced Cr column operated at 1100°C, and equilibrations were done at 60°C for 2 hours, after thorough flushing of the loaded sample carrousel (200 mL/min for min 20 minutes). This specific combination of equilibration temperature and time is sufficient for equilibrations using an online evacuated system, based on rigorous experimentation with different settings and is currently often used by the community [63]. Running samples in duplicate was not feasible given the long processing time, however, multiple standards which have non-exchangeable H are included in each run, which provide a good measure of reproducibility, and we assume samples are sufficiently homogeneous for subsample δ13C, δ15N and δ2H data to be representative.
Non-exchangeable hydrogen stable isotope ratios of samples were measured along with three sets of ‘open’ standards (CBS: Caribou Hoof Standard, −157.0‰, KHS: Kudu Horn Standard, −35.3‰ and Caffeine, −77.3‰) and two sets of sealed standards (GISP: Greenland Ice Sheet Precipitation, −189.5‰ and USGS53: Lake Shala Distilled Water: + 40.2‰; - [64]) which were included in each run. Analytical error was determined to be < 2.5‰.
Isotopic values are reported as δ values in parts per mill (‰) and are the ratio of heavier to lighter isotopes against the internationally agreed standards for carbon (V-PDB), nitrogen (AIR), and hydrogen (V-SMOW). All statistical tests on isotopic data, such as Kruskal-Wallis, Student’s t-tests, and One-way ANOVA, were conducted in R (v.4.3.3).
Modelling of isotopic data
We employed tools in R to visualise the isotopic niche space of taxa. We generated standard ellipses areas (SEA) with 40% confidence intervals in ggplot2 (v.3.5.1) to represent the isotopic niche space of terrestrial taxa, and calculated their niche space overlap metrics using SIBER (v.2.1.9) [65].
To provide estimations of isotopic niche overlap using the combined means of all three isotopic proxies (termed ‘isotopic niche regions’), we used nicheROVER (v.1.1.2). NicheROVER provides bivariate projections of multivariate (e.g., δ13C, δ15N and δ2H values) niche regions and is used to model the predicted niche region between multiple taxa. It uses Bayesian inference and Monte Carlo simulation to model group-specific multivariate distributions of isotopic values. Niche regions were defined at 95% confidence level as the highest-density regions based on posterior samples of group means and covariances. Directional overlap is calculated as the probability that individuals from one group fall within the niche region of another group, without assuming uniform distribution of individuals. Bivariate projections are direct representations of modelled data and not the result of dimensionality reduction techniques. As a limitation, nicheROVER assumes approximate multivariate normality, which may limit accuracy when data are strongly skewed or multimodal [66]. We acknowledge that the translation of dietary sources into bone collagen stable isotope values is influenced by species-specific differences in metabolic routing and TDFs, which may introduce uncertainty into the reconstructed niche overlaps. Future investigations aimed at quantifying such offsets would help refine interpretations of stable isotope value niche overlaps.
To assess the relationship between animal bone collagen δ2H and the average δ2Hmw values at Aqaba Castle we used interpolated data from the Online Isotopes in Precipitation Calculator (OIPC). According to the OIPC, the mean annual δ2Hmw value at Aqaba Castle is −6.5‰, with monthly average δ2Hmw values ranging from −21‰ to +23‰ [67–69].
To demonstrate the utility of δ2H for geo-locating herbivorous animals, we predict the geographical home ranges of gazelles and chukars using the R-package IsoriX (v.0.9.2) [70]. This incorporates published global δ2Hmw values from the Global Networks of Isotopes in Precipitation (GNIP) [69] and uses kriging geostatistical modelling to fit a spatial model to the δ2H data, then uses this construct an δ2Hmw isoscape by estimating values at unsampled locations, weighting observations according to their geographic distance and spatial autocorrelation [70]. In our study, IsoriX was used to spatially identify gazelle and chukar home range according to similarities between the predicted δ2Hmw isoscape and their bone collagen δ2H values. IsoriX provides proposed matches between the isotopic values of samples and geographic locations (indicated by p-values approaching one), but this does not necessarily represent the exact place of origin. This limitation is particularly relevant given that diet-collagen fractionation factors are not known for these species. Therefore, no species-specific δ2Hmw–δ2Hcollagen offsets were assumed. This introduces uncertainty into the absolute geographic assignments. As a result, we can only relatively interpret the isoscape-mapping results in relation to the expected home range behaviours of the identified species. These two taxa generally have restricted home ranges favouring high altitudes [71,72], and they therefore act as suitable proxies for determining whether their bone collagen δ2H may reflect these environments.
A further limitation is that no GNIP station data relevant to the study area is available east of approximately 36°E, meaning that the IsoriX isoscape map plot is bounded by this longitude. Inclusion of additional points farther east would require extrapolation and would produce less precise and more generalised δ2Hmw gradient predictions. Predictions of high δ2Hmw values in relation to elevation therefore derive primarily from the ‘Saint Catherine’ GNIP station in the Sinai Peninsula (28.7°N, 34.1°E, 1350 m a.s.l.) [69]. We assume that similar environmental conditions occur at the high elevations immediately east of Aqaba and therefore these areas also share similarly high δ2Hmw as the Sinai Peninsula.
Results
Almost all samples (218/220, 99%) yielded results adhering to all quality control indicators [56,57]. Two cat samples (AQcat05 C:N 2.5; AQcat07 C:N 2.8), one cattle (AQbos09 C:N 5.7) and one dog (AQdog08 C:N 11.9) had atomic C:N ratio values outside the acceptable range (C:N 2.9–3.6). The dog and cattle sample were not resampled and are not discussed further. The two cat samples were re-extracted and underwent ultrafiltration after gelatinization, yielding successful results. The analysis of δ2H of three cats (AQcat05, AQcat07, AQcat08) was not possible due to a lack of collagen.
In contrast to previous studies mentioning the fraction of exchangeable H being as high as 25% of the total H within bone collagen [9,10,12,30,34], our results show much lower fractions between 4.7–10.5% (μ = 6%). There is, however, a lack of published literature discussing discrepancies in exchangeable-H fractions, and there is currently no consensus on a precise fraction for bone collagen. The experimentally determined fraction of exchangeable hydrogen strongly depends on the technique used, and the few published estimates [9,10,12,30,34] mostly relied on offline equilibration methods. Our data was generated using an online dual equilibration approach and avoided the re-adsorption of ambient water vapor to which some offline methods are prone, and which may lead to an inflation in exchangeable H content. Furthermore, our measurements are in line with other recent measurements on collagen (L. Wassenaar, personal communication). Our results call for an interlaboratory comparison study using the best available approaches to re-evaluate the fraction of exchangeable H in collagen, and other organic matrices, and raise some concern for comparing data measured with different techniques where likely unrealistic values of %Hex were assumed.
Carbon (δ13C) and nitrogen (δ15N) results
Bone collagen carbon and nitrogen values are overlapping for cats (note: all following ± values are one standard deviation from the mean; δ13C −15.7 ± 0.8‰, δ15N 11.5 ± 1.1‰, n = 20), ravens (δ13C −15.4 ± 1.3‰, δ15N 12.3 ± 1.2‰, n = 10), hyenas (δ13C −15.9 ± 0.9‰, δ15N 12.0 ± 0.8‰, n = 10), and dogs (δ13C −16.1 ± 0.8‰, δ15N 12.1 ± 1.0‰, n = 7) (Fig 2; Supplementary Fig S1 in S1 File; S1 and S2 Tables in S1 File). Statistical tests were performed to assess their similarities. Hares also showed overlapping values (δ13C –15.1 ± 3.2‰, δ15N 11.2 ± 2.4‰, n = 9); however, they exhibited a comparatively wider range of values and as they are non-carnivorous, were not tested alongside other taxa. As the hyena δ13C data were not normally distributed (Shapiro–Wilk δ13C W = 0.752, p = 0.0037), a nonparametric Kruskal–Wallis test showed no statistically significant difference in the median δ13C values of these four taxa (δ13C χ2 = 0.122, df = 2, p = 0.941), but detected a significant difference in δ15N values (δ15N χ2 = 7.055, df = 2, p = 0.0294). Cats and dogs show no statistically significant difference in their mean δ13C values (Welch Two Sample t-test t = 1.114, df = 9.551, p = 0.2927). There was, however, a statistically significant difference in their δ15N values (Kruskal–Wallis χ2 = 6.491, df = 1, p = 0.0108).
Error bars signify one standard deviation from the mean.
The average values of hares (δ13C −15.1 ± 3.2‰, δ15N 11.2 ± 2.4‰, n = 9) overlap with carnivores but with high standard deviation and variance (δ13C σ = 10.3; σ = δ15N = 5.3). The δ15N values of gazelles (11.6 ± 1.2‰, n = 10) and chukars (11.6 ± 1.8‰, n = 3) were high, while their δ13C values (−18.4 ± 0.7‰, and −18.6 ± 0.2‰, respectively) were the two lowest of all terrestrial animals.
Donkeys showed relatively high δ13C values (−16.6 ± 1.1‰, n = 3) but the lowest δ15N values (7.6 ± 1.4‰, n = 3) of all terrestrial species. Camels share similar values to donkeys (δ13C −16.4 ± 1.8‰, δ15N 8.6 ± 2.0‰, n = 10) and chickens (δ13C −16.5 ± 0.6‰, δ15N 8.9 ± 0.4‰, n = 13). Cattle had the highest mean δ13C values of animal domesticates (δ13C −15.6 ± 3.9‰, δ15N 9.0 ± 1.3‰, n = 9) but with high variance (σ = 15.3). Goats (δ13C −17.6 ± 0.8‰, δ15N 10.1 ± 0.9‰, n = 14) and sheep (δ13C −18.3 ± 0.7‰, δ15N 9.9 ± 1.1‰, n = 11) have values that reflect mostly C3 plant diets with some C4 plant input.
The average δ13C values of all the fish (−9.5 ± 2.5‰, n = 89) are higher than those of all the terrestrial animals (−16.5 ± 2.1‰, n = 129), while their average δ15N values are lower (7.2 ± 1.6‰ vs 10.6 ± 1.9‰, respectively). Snappers had the highest average δ15N values (9.3 ± 0.7‰, n = 9), followed by groupers (8.2 ± 0.6‰, n = 15) and jacks (7.9 ± 0.8‰, n = 15). The lowest average δ15N values belonged to the Scaridae family, parrotfish (Scarus sp.) (4.8 ± 0.5‰, n = 9) and bicolour parrotfish (Cetoscarus sp.) (5.1 ± 0.6‰, n = 4), denoting their low trophic levels as predominantly herbivorous fish.
Hydrogen (δ2H) results
Cats have the highest average δ2H values (+31.0 ± 10.3‰, n = 17) of all terrestrial species and the fourth highest of all taxa (Fig 3; S1 Fig in S1 File). After cats, the highest mean δ2H values in terrestrial species have been recorded in ravens (+24.3 ± 11.3‰, n = 10), chukars (+22.3‰ ± 10.8, n = 3) and gazelles (+20.8 ± 13.0‰, n = 10). Dogs have considerably lower mean δ2H values (+5.0 ± 14.9‰, n = 7). The lowest average δ2H values of terrestrial animals belonged to cattle (−33.5 ± 7.5‰, n = 9), followed by chickens (−25 ± 12.4‰, n = 13). Although hyena δ13C values are similar to cats and ravens, their average δ2H values are lower (+15.7 ± 9.7‰, n = 10). Welch Two Sample t-tests showed no significant difference in the δ2H means of cats and ravens (t = 1.489, df = 17.314, p = 0.1544).
(a) δ13C vs δ2H; and (b) δ15N vs δ2H results. Error bars signify one standard deviation from the mean.
Several taxa show significant linear correlation coefficients between δ2H and the other two isotopic proxies. Jacks (r = −0.71, R2 = 0.5, t = −8.451, df = 28, p = < 0.001) had the strongest linear relationships between δ13C and δ2H values, followed by cats (r = 0.62, R2 = 0.37, t = −19.685, df = 35, p = < 0.001). There is a strong linear correlation between δ15N and δ2H values in dogs (r = 0.89, R2 = 0.73), but this relationship was not statistically significant (t = 1.175, df = 12, p = 0.263). Sheep show a moderate correlation between δ15N and δ2H values (r = 0.48, R2 = 0.57, t = 5.825, df = 10, p = 0.0002), as do soldier bream (Argyrops sp.) (r = 0.69, R2 = 0.47, t = 3.3975, df = 9, p = 0.0079) and jacks (r = 0.66, R2 = 0.43, t = −6.786, df = 14, p = < 0.001). Overall, the mean δ15N and δ2H values of all fish show a moderate to strong linear correlation (r = 0.72, R2 = 0.52, t = −3.398, df = 88, p = 0.0010), more so than all terrestrial animals combined (r = 0.53, R2 = 0.28, t = 3.569, df = 125, p = 0.0005). Cats show a weak coefficient of determination between δ15N and δ2H values with a moderate negative correlation coefficient (r = −0.43, R2 = 0.18, t = −7.342, df = 16, p = < 0.001).
The highest δ2H values are found in fish, and the combined average δ2H value of all fish was higher (δ2H + 22.1 ± 42.1‰) than all terrestrial animals (δ2H + 3.7 ± 22.4‰), but with a larger range of values. Jacks possessed the highest average values (δ2H + 79.0 ± 39.7‰, n = 15), followed by snappers (δ2H + 59.1 ± 14.5‰, n = 9) and groupers (δ2H + 38.3 ± 17.9‰, n = 15) (Fig 3; S2 Table in S1 File). The standard length (SL) ranges of fish, which is the distance between the snout of the fish to the base of the caudal fin, was estimated from their osteometrics [48], allowing us to compare the estimated sizes of fish to their isotopic values (S2 and S3 Figs in S1 File). Although the median SL of fish are discrete, non-continuous values, linear regression analysis was appropriate here because there are 12 unique SL values (bins), allowing it to be treated as a continuous dataset. We found a stronger positive correlation between the SL of all fish and δ2H values (r = 0.61, R2 = 0.37, t = −4.927, df = 176, p = < 0.001) than between SL and δ15N values (r = 0.28, R2 = 0.08, t = −25.435, df = 176, p = < 0.001).
Discussion
The isotopic signatures of the studied terrestrial fauna from Aqaba Castle reflect differences in habitat, domestication status, physiological and behavioural adaptations to aridity, dietary sources, and the isotopic composition of water sources. To contextualise the environmental factors influencing the isotopic baselines of primary producers in the region, Fig 4 illustrates these processes and offers insight into the mechanisms of 2H-enrichment observed in our study.
(a) Terrestrial plant food sources, terrestrial primary consumers, and fish. The δ2H baselines of rainfall (cloud silhouettes) are the average annual values within the lowlands, and the hyperarid hinterland. Groundwater δ2H baseline (water well silhouette) is the approximate range of underground aquifer values local to the region [73]. Animal silhouettes do not depict their exact locations of origin. Although higher altitudes generally mean lower δ2Hmw values [74], the GNIP station in the highlands of the Sinai Peninsula to the west [69] suggests that these hyperarid highland areas have higher δ2Hmw values than the lowland plains where Aqaba is located. This map generated in QGIS (v.3.34.13) using SRTMGL3 elevation data from NASA’s LP DAAC, with water bodies derived from Natural Earth vector datasets. These are public domain datasets and this map is suitable for reuse in CC BY 4.0 licensed publications with appropriate attribution. (b) Generalised flowchart detailing 2H-enrichment within terrestrial and aquatic system trophic chains relevant to the region of study. Silhouettes are from PhyloPic (https://www.phylopic.org/).
Terrestrial species
To determine the diets of herbivores, we estimate local δ13C end-member values for C3 plants as approximately −24.9‰, and for C4 plants as approximately −13‰, based on local average annual precipitation and altitude [75]. Accounting for a diet-collagen enrichment of roughly +4 to +5‰ [1,76,77], collagen δ13C values of a purely C3-based diet are therefore estimated at approximately −21 to −20‰, while a purely C4-based diet would yield collagen values around −9 to −8‰. The isotopic values of wild gazelles, hares and chukars reflect their hyperarid habitats, variably indicating the consumption of wild C3 and C4 plants. Some animals possessed higher than expected δ15N values (Figs 2 and 3; S1 and S2 Tables in S1 File). Plant δ15N values have been shown to be negatively correlated with water availability, due to processes such as ammonia volatilisation and N retention by arid-adapted species leading to 15N-enrichment in plants and higher consumer δ15N values [5,7,78]. Opportunistic carnivorous ravens and hyenas share similar δ13C and δ15N values, though differ in their δ2H values, which may be explained by specific dietary sources differentially affecting 2H-enrichment.
On average hares had the highest δ13C values of all terrestrial animals (δ13C −15.1 ± 3.2‰, n = 9). Hares consumed more C4 plants than other herbivores, with one individual (δ13C −9.3‰) almost exclusively consuming C4 plants. Hare δ13C and δ15N values exhibit a strong linear correlation (R2 = 0.75), and the unexpectedly high δ15N values of some individuals might possibly be explained by coprophagy [79]. The repeated recycling of N rich caecotroph waste may theoretically lend to a small but significant 15N-enrichment over time, if hares were practicing repeated coprophagous behaviour [80]. It is however likely that physiological stress due to water scarcity, as has been observed with arid-adapted herbivores elsewhere [6,7], is mostly responsible for the relatively high δ15N values.
In general, hares demonstrate high variance in values (δ13C σ = 10.3; δ15N σ = 5.6) suggesting individual diets varied considerably. Studies have shown that cape hares are dietary generalists that adapt their diets according to the available food resources [81]. Hares also had higher average δ2H values (+3.1 ± 7.8‰) than most domesticated animals excluding dogs, donkeys and cats, although they had the lowest δ2H of all wild taxa. This indicates their low trophic position among wild animals but also suggests there are different contributing factors influencing 2H-enrichment between domestic and wild animal taxa, such as disparities between the baseline δ2H values of consumed wild and domestic plants. It is likely that most domestic animals were fed agricultural fodder grown in areas with relatively lower δ2Hmw values, or which were irrigated with 2H-depleted groundwater.
Gazelles primarily consumed C3 plants with little variation (δ13C −18.4 ± 0.7‰, σ = 0.5, n = 10), likely reflecting the dietary preference of mountain gazelles (Gazella gazella) for C3 acacias, and indicating restricted home ranges [82,83]. Both gazelles and chukar values reflect a predominantly C3 diet, though their δ15N results are higher than expected for herbivorous species. The high average δ15N values of chukars (11.6 ± 1.8‰, n = 3), gazelles (11.6 ± 1.2‰, n = 10) and hares (11.2 ± 2.4‰, n = 9) reflect the consumption of 15N-enriched wild plants commonplace in the arid region. Generally, domesticated herbivores exhibit lower δ15N values in comparison to their wild counterparts. Both gazelles (δ2H + 20.8 ± 13.0‰, n = 10) and chukars (+22.3 ± 10.8‰, n = 3) have similarly high δ2H values, that most of their moisture intake came from consuming wild plants in areas of low rainfall, likely at higher elevations. While altitude and δ2Hmw values are usually negatively correlated [74], GNIP data from the ‘Saint Catherine’site in the Sinai peninsula [69] suggests that δ2Hmw values in the highlands surrounding Aqaba may be higher than the coastal plain.
As hyenas are mostly carnivorous, their average δ2H values (+15.7 ± 9.7‰, n = 10) are likely heavily dictated by dietary enrichment from prey. Hyenas, however, fall within the δ2Hmw range for Aqaba, which indicates that they were not consuming animals with higher δ2H values, such as high trophic level fish. Carrion-eating ravens on average had higher δ2H values (+24.3 ± 11.3‰, n = 10), as well as the second highest mean δ13C values (15.3‰ ± 1.3, n = 10), which may suggest some scavenging of fish. Ravens likely took the opportunity to scavenge fish carcasses washed ashore or frequented moorings looking for something edible, which are scavenging behaviours which have been observed in other maritime environments [84]. Ravens also have the highest average δ15N values of any animal (12.3 ± 1.2‰, n = 10), partially explainable by an opportunistically carnivorous diet, but this is also likely related to the relative 15N-enrichment of uricotelic organisms [85]. It is unknown if the mechanisms causing relative 15N-enrichment in uricotelic taxa also affect 2H-enrichment.
Domestic donkeys, camels, cattle, and chickens were found to share similar δ13C values, indicating shared food sources that included some C4 plants. No archaeobotanical work was conducted at the site, although some C4 crops with longstanding histories of cultivation in Southwest Asia include sorghum (Sorghum bicolor), foxtail millet (Setaria italica) and broomcorn millet (Panicum miliaceum) [86,87]. Wild C4 plants may have also been consumed by some domesticates. Aqaba lies within the Sahara-Sindian biogeographic region, which globally has the second highest number of endemic C4 plants [55,88]. Sheep and goats were likely raised by pastoralists living in the environs of Aqaba [48]. It is possible that sheep and goats consumed small amounts of wild C4 plants while pasturing near Aqaba, as halophytes would be an important food source for salt balance. Other sources of 13C-enrichment may have been the use of dried small fish as fodder, a practice that has been reported for 14th century coastal settlements in Oman [89], or the use of seagrass as a fertiliser for agriculture [90,91].
Cattle exhibit the widest range of δ13C values (−19.1‰ to −10.2‰) and have δ2H values (−33.5 ± 7.5‰, n = 9) below the range of the local meteoric water. Cattle were generally rare at Aqaba, justifiable considering the hyperaridity of the region and their high water requirements [48,92]. It is theorised that at Roman period Aqaba (Ayla), cattle were imported due to the unsuitable climate for cattle breeding [48,93,94]. Their low δ2H values might be explained by their importation from less water-stressed regions with lower δ2Hmw values. However, we propose that cattle may have been raised locally, as their δ2H values may have been heavily influenced by the isotopic signatures of their water sources. The discovery of Early Islamic period wells beneath Aqaba Castle suggests that the site was situated over a groundwater source once used for agriculture [26]. Nearby tested underground aquifers have δ2H values ranging from −51.0‰ (Eilat-10) to −33.2‰ (Eilat-16) [73], and similarly 2H-depleted water sources could have supplied drinking water for animals. Consuming substantial amounts of aquifer water could lead to a decrease in bone collagen δ2H values, placing them outside the local δ2Hmw value range.
Chickens also had values below the δ2Hmw value range of Aqaba, possibly due to a consistent imbibement of aquifer water. Like cattle, chickens require substantial amounts of water relative to their body weight [95]. Chickens need shelter from predators, and they also must be supplied with clean water to avoid diseases. The locations of chicken coops likely corresponded with that of water wells, either inside Aqaba Castle or perhaps in the surrounding village. Other, more arid-adapted domesticates, such as sheep, goats, donkeys and camels, require much less water per unit of body weight [96–98]. Due to their relatively low water requirements, their bone collagen δ2H values are likely more influenced by food, which may have included local cultivated and wild plants with δ2H values closer to meteoric water.
This information provides valuable insights into how various husbandry practices influence domestic species at the site, particularly in relation to their dietary adaptation to local environmental conditions. Sheep, goats, donkeys, and camels likely consumed some wild plants during pasturing or while being used as transportation animals. Although cattle may also have imbibed aquifer water, the high variance in δ13C values, low δ2H values, and their relatively scarcity in the faunal assemblage, may suggest that at least some individuals were imported. If they were reared at the site, the parallel of low δ2H values between cattle and chickens probably lies in the human provisioning of water from the same source of groundwater. If so, cattle and chickens were kept in the same protected anthropogenic environment with a permanent water source, likely inside the Castle itself or in villages in its immediate surroundings.
Fish
Fish stable isotope values reflect their trophic levels, diets, and the environment of the Red Sea. Although marine systems generally have longer trophic chains [1,99], at Aqaba Castle the average δ15N values of all fish (7.2 ± 1.6‰, n = 89) is lower than those of all terrestrial animals (10.6 ± 1.9‰, n = 126) (Figs 2 and 3; S2 Table in S1 File). Low fish δ15N values can be explained by many of the fish being reef or seagrass dwelling species which generally have low δ15N values [100], while in comparison, hyperarid environment are conducive to higher δ15N values in terrestrial animals. While possessing low δ15N values, the average δ13C value of all fish is high (−9.5 ± 2.5‰). Modern samples of primary producers, seagrass and macroalgae, from the Red Sea have high δ13C values (μ = −7.2‰ and −13.3‰, respectively) [101], which could explain the high combined average δ13C values of fish. Jacks, snappers, groupers, and soldier bream, however, have lower δ13C values than emperors, wrasses, mullets and parrotfish. These differences suggest that these groups were fished from different environments, although only jacks were securely identified as pelagic [48], where primary producers typically exhibit lower δ13C values than those in benthic environments [102,103].
2H-enrichment and its relation to trophic level, metabolism, and diet
The δ2H values of marine fish identified from Aqaba Castle appear positively correlated with their assumed trophic levels, with pelagic carnivorous jacks (Carangidae) exhibiting the highest δ2H values and algae-eating parrotfish (Scaridae), occupying a lower trophic position, exhibiting the lowest values. Both δ2H and δ15N values generally demonstrate a positive correlation with increasing trophic level, however, with exception of jacks, which despite being estimated as the largest of the identified fish, possess lower δ15N values compared to snappers (Lutjanidae).
We see moderate correlations between the average SL for each fish family/genus and their average δ2H values (r = 0.61, R2 = 0.37), while there is little correlation between SL and δ15N values (r = 0.28, R2 = 0.08) (S2 and S3 Figs in S1 File). This correlation between 2H-enrichment and body size is a phenomenon also observed in studies of freshwater fish from the lower Ebro River, Spain [104] and Lake Winnipeg, Canada [105]. The strength of this correlation in our study is seemingly taxa dependent. For example, jack body size and δ2H are less strongly correlated, but a dearth of species-level identifications prevents examination of inter-species variation within this family. In line with the aforementioned studies [104,105], these results suggest that fish δ2H values reflect dually metabolic factors associated with body size and trophic enrichment. Fish δ15N values may instead be partially affected by environmental factors. Modern δ15N values of primary producers in the Red Sea become progressively lower on a south-north gradient in the Red Sea [101], likely influencing the δ15N values of fish based on their home ranges. The baseline δ2H for marine systems is presumably that of ambient seawater and therefore near 0.0‰. However, the environmental factors affecting δ2H values in marine fish remain poorly understood, particularly given the limited understanding of how evaporation and water mass differences specific to the Gulf of Aqaba affect δ2H values. Nonetheless, we assume that the δ2H values of marine fish broadly reflect trophic level increases, although 2H-enrichment is also influenced by body size-dependent metabolic processes.
A positive correlation between δ2H values and trophic level is also evident in terrestrial animals provided that domestic and wild animals are analysed separately according to their baseline food and water sources (Figs 3 and 4; S1 Fig in S1 File). Most herbivores have relatively low values within the local δ2Hmw range, while carnivores have the highest values. The average δ2H value of all domesticated herbivores is −13.4 ± 15.9‰ (n = 60), while omnivorous dogs (δ2H + 5 ± 14.9‰, n = 7) are enriched compared to herbivores by +18.4 ± 21.8‰. Cats, which have the highest values, are enriched compared to omnivorous dogs by +26 ± 18.1‰ (δ2H + 31 ± 10.3‰, n = 17), but are enriched by a factor of 44.4 ± 18.95‰ relative to herbivorous livestock, which shows a similar TDF of +30–50 ‰ from herbivores to omnivores in the study by Reynard and Hedges (2008) [10]. At Aqaba Castle, we roughly estimate the stepwise trophic level increase to be around δ2H ~ +20‰. However, given the sizable error ranges presented in our data, there are likely other factors contributing towards the δ2H values of different species, such as species-specific water requirements, baseline δ2Hmw values, and dietary composition [37]. For example, gazelles and chukars have relatively high δ2H values contrary to their low trophic levels. These high values compared to domestic herbivores can be explained by their home ranges being restricted to regions with higher baseline water source values.
Cats on average have the highest δ2H values, but lower δ15N values than other meat-eating taxa such as ravens, dogs, and hyenas. The weaker linear correlation between cat δ15N and δ2H values points to individually more varied diets comprised of terrestrial and marine foods. It is reasonable to assume that cats were inhabiting the fortress, and that their survival partially depended the delivery of fresh fish to the Castle’s kitchen, found most abundantly in Ottoman period contexts at the site [48].
The strong linear correlation between dog δ15N and δ2H values means that dietary protein sources dictating δ15N also strongly affect the variation in δ2H bone collagen values. The average dog (n = 7) δ15N (12.1 ± 1.0‰) and δ2H (+5.0 ± 14.9‰) values are roughly one trophic level above that of the combined averages of domestic livestock (δ15N 9.2 ± 1.6‰; δ2H −13.4 ± 15.9‰, n = 60), indicating that their main sources of meat were domesticated animals. This most likely included the slaughtering refuse of domestic animals such as sheep, goats and dromedaries, which likely consumed some C4 plants. Some individual dogs found at Aqaba Castle may have been hunting dogs, specifically ‘Bedouin greyhounds’ [48], therefore hunted animals may have also been a source of food.
The isotopic niche spaces of fauna
To visualise and quantify the isotopic niche space overlap of terrestrial taxa we generated standard ellipse areas (SEA), and calculated their spatial overlap in SIBER (v.2.1.9) [65]. There was considerable overlap in the δ13C vs δ15N value SEA of omnivores, carnivores and some herbivores, however, the inclusion of δ2H values permits some discrimination of isotopic niche space (Fig 5; S5 Fig in S1 File; S3 Table in S1 File). Cats showed no isotopic niche overlap with other domestic taxa when δ2H values are included, although there is convergence in δ13C vs δ2H isotopic niche space between cats, hyenas and ravens, which is expected as they all consume meat. However, the δ15N vs δ2H value SEA are overlapping between the cats and ravens, gazelles, chukars, and hyenas (S5 Fig in S1 File), contrary to their vastly different diets. The high δ2H values of cats from urban contexts is likely linked to fish consumption or their status as non-obligate drinkers, whereas gazelles have high δ2H values due to the relatively high δ2H baselines of water-stressed environments. This convergence of isotopic niches reflects environmental or physiological factors rather than actual dietary similarities, emphasizing the need to consider environmental factors and dietary behaviour to disentangle the real-world relevance of isotopic niche space.
(a) δ13C vs δ15N; and (b) δ13C vs δ2H values.
Using NicheROVER (v.1.1.2) [66], we modelled the isotopic niche regions (δ13C, δ15N, δ2H) of four animals with overlapping SEA: cats, dogs, hyenas, and ravens (Fig 6; S6 and S7 Figs in S1 File). Hyenas had the highest degree of overlap with dogs (82.9%). This indicates that they likely consumed similar sources of protein, which for hyenas would have involved opportunistically scavenging on pastoral and wild animals found in the surroundings of Aqaba, whereas dogs likely had these foods provisioned. The niche regions of cats overlap mostly with those of ravens (71.7%), then hyenas (37.7%), and the least with dogs (10.4%). The generalist omnivorous diet of ravens, consisting of carrion, small mammals, and vegetable matter [84], is reflected in high degrees of niche overlap with the other examined taxa, although they overlap the most with cats (46%). It is likely that these two species consumed similar food sources, perhaps including small mammals, such as rodents or fish. It is feasible that ravens were also scavenging fish carcasses or other marine foods from the port of Aqaba, a food source which is a known indicator of cat-human commensalism [106].
Pairwise directional niche overlap probabilities are shown for cats, dogs, hyenas, and ravens based on their δ13C, δ15N, and δ2H values. The y-axis lists the source group (individuals tested for overlap) and the x-axis lists the target group (niche region overlapped into). Each cell displays the mean probability with that individuals from the row taxon fall within the 95% highest-density niche region of the column taxon. Higher overlap probabilities indicate greater predicted niche region overlap.
Bone collagen δ2H and meteoric water (δ2Hmw) values
The average precipitation δ2Hmw values were calculated using the Online Isotopes in Precipitation Calculator (OIPC), which calculates an annual average of −6‰ and a monthly range of −21‰ to +23‰ for Aqaba Castle [67–69,107]. A study at Sede Boqer in the Negev Desert, located approximately 145 km to the north of Aqaba Castle, demonstrated that soil water δ2H values were around 20‰ lower than local δ2Hmw. Dewfall was determined to also be an important source of water for these desert-adapted plants, which is relatively 2H-enriched relative to precipitation [44]. For cultivated plants, however, the main source of water was likely captured rainwater, groundwater used for irrigation, or soil water, the latter two of which are 2H-depleted relative to rainfall. We estimate a trophic enrichment from plant foods to herbivores to be ~ +20‰ based off our observations of trophic enrichment in terrestrial animals. Most domesticated herbivores were therefore expected to have δ2H values that align well with the local δ2Hmw range [22], reflecting an enrichment of diet-tissue from consumed plants which negates the relatively depleted values of soil or groundwater compared to rainfall. Carnivores and non-obligate drinkers were expected to have trophically enriched 2H values with less influence from drinking water.
As anticipated, most terrestrial animals have average δ2H values that fit into the monthly average δ2Hmw range, except for ravens and cats with higher means, and cattle and chickens with lower means. Two sheep (n = 2, 18.2%) are below the δ2Hmw range, as are most cattle (n = 8, 80%) and chickens (n = 8, 61.5%). While differences between domesticated livestock were observed, collectively their average bone collagen versus average annual rainfall (δ2H - δ2Hmw) value offset was −6.9‰ (S2 Table in S1 File). The domesticated herbivores with the lowest δ2H - δ2Hmw value offsets were camels (−1.4‰), sheep (−4.5‰) and goats (+6.8%), which can be explained by their relatively low water intake requirements compared to chickens (−18.5‰) and cattle (−27.0‰). Wild herbivores, however, showed on average a greater bone collagen δ2H - δ2Hmw value offset (+20.3‰), suggesting that they may have been acquiring most of their nutritional requirements from plants from more water-stressed areas with higher baseline δ2H values, and supporting similar conclusions drawn from their relatively high δ15N values.
Half of the individual gazelles (n = 5) and ravens (n = 5), most cats (n = 13, 76.5%), two chukars (66.7%) and one hyena (10%) have δ2H values higher than the range of average monthly δ2Hmw values. Although diet and species have been shown to affect the degree of diet-tissue δ2H fractionation [37], we hypothesise that the higher bone collagen values of wild fauna are related to their origin from areas with higher baseline values. It is likely that game was brought to the Castle by Bedouin hunters who roamed at considerable distance from the settlement [48]. This might offer an explanation why the δ2H value ranges of half the ravens and gazelles, most chukars, and one hyena fall outside the mean annual δ2Hmw value range for Aqaba.
Home ranges of gazelles and chukars
Our δ2Hmw isoscape (Fig 7) modelling places gazelles and chukars in restricted home ranges in the highly arid surroundings of Aqaba, demonstrating the potential utility for bone collagen δ2H be utilised for determining geographic provenance, as has been suggested elsewhere [22]. This, however, must be interpreted cautiously, given that local plant species δ2H values, and species-specific diet-collagen fractionation factors are currently unknown. Even so, the proposed restricted home ranges within the arid highlands surrounding Aqaba align well with the expected behaviour of mountain gazelles (Gazella gazella), which favour mountainous environments [71]. Most gazelles from Aqaba Castle indeed fall within the estimated size range of this species [48]. While acknowledging the stated limitations, we speculate that the high δ2H values of most gazelles may indicate home ranges in the highlands of the southern Sinai Peninsula to the west, and the Jebel Al-Shara to the southeast, which, based on environmental similarity and supported by the IsoriX mapping, likely exhibits δ2Hmw values comparable to the former. The low δ2H value of AQgaz05 indicates it may have had a home range consisting of lowland areas, including within the Wadi Arabah. This individual might belong to a species that favours savannahs, plains, valleys, or wadis, such as Gazella dorcas or Gazella subgutturosa [108,109].
Isoscape generated in IsoriX (v.0.9.2) [70] using the annual mean meteoric water (δ2Hmw) values recorded by the GNIP [69]. This map is bounded by the location of GNIP stations from data was used to generate the δ2Hmw isoscape (a) Interpolated δ2Hmw values for the region. Red triangles indicate the location of isotopic measurements at GNIP stations. The GNIP station located in the Sinai peninsula (Saint Catherine) recorded unexpectedly high δ2Hmw values contrary to its high elevation (1350m) [69], therefore, similarly high δ2Hmw values were predicted for the highland areas east of Aqaba. (b) Higher p-values indicate higher similarity in bone collagen δ2H values of the individual gazelle specimens and δ2Hmw values. Red circles indicate the location of Aqaba Castle. Most gazelles (n = 9) are predicted to have had home ranges within areas of higher elevation. This map is an original output produced by the authors using public domain GNIP data and is shared under a Creative Commons Attribution 4.0 International License (CC BY 4.0).
Chukar values (n = 3) were also plotted along the δ2Hmw isoscapes (S4 Fig in S1 File). Two of the three individuals possessed high bone collagen δ2H values indicating they were restricted to the surrounding highlands. The third instead had values matching a wide array of areas with lower altitudes. Chukars favour the leaves and grains of wild plants, and have restricted home ranges with a general preference for high altitudes [72].
The isoscape mapping of the bone collagen δ2H values aligns well with the expectations of the ranging behaviours of G. gazella and C. alectoris, although a lack of knowledge regarding TDFs is a considerable limitation preventing more precise geolocations. In the future, an approach combining multiple isotopic proxies often used for provenancing, such strontium (87Sr/86Sr) from tooth enamel, may be beneficial for assessing the utility of bone collagen δ2H for provenance studies.
Conclusion
The analysis of animals from Ottoman-period Aqaba Castle highlights the value of incorporating δ2H values into multi-isotopic studies. This research establishes regional isotopic baselines, which for δ2H values are strongly correlated with estimated local precipitation value ranges. Livestock with higher water needs, such as cattle and chickens, instead exhibit δ2H values below the local precipitation range, possibly relating to their relatively greater water needs leading to more consumption of 2H-depleted aquifer water. The potential for bone collagen δ2H values to indicate animal home ranges is demonstrated by the alignment of wild gazelle and chukar values with the δ2Hmw values of the arid highlands surrounding the site, consistent with their expected behavior. 2H shows clear trophic enrichment in terrestrial animals, while among marine fish δ2H values correlate with both trophic level and body size. Another strength of including δ2H values is the discrimination of isotopic niche spaces where the δ13C and δ15N value niche spaces of animals unexpectedly overlap due to environmental conditions, such is the case for the water-stressed Aqaba region. The inclusion of δ2H values in niche space calculations therefore provides useful information about diet and trophic status complementary to δ15N values, but most importantly indicates baseline water values related to precipitation, crop irrigation, or drinking water sources.
More research is needed to concretely understand the mechanisms defining 2H trophic enrichment, and to disentangle the myriad physiological and environmental factors that differentially define this enrichment for each species. Even so, our study suggests that δ2H values are particularly valuable as an environmental indicator, especially for discriminating isotopic niche, investigating drinking water sources and characterizing the hydrological conditions of animal habitats.
Supporting information
S1 File. Includes S1-S2 Notes, S1-S7 Figs, S1-S6 Tables.
https://doi.org/10.1371/journal.pone.0328991.s001
(PDF)
Acknowledgments
We greatly appreciate the support of Yannick Stroobandt (KU Leuven) for the stable isotope analyses. Permission to excavate, export, and study all bone samples from Aqaba Castle was granted to J. De Meulemeester, the late excavation director of the ‘Aqaba Castle Project, by Dr. Fawwaz al-Khraysheh, Director-General of the Department of Antiquities of Jordan.
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