Figures
There are formatting errors in Table 1, “List of Secoviridae isolates and related sequences used in the analyses, including their acronyms and Genbank accession numbers.” Please see the corrected Table 1 here.
There is an error in Fig. 5, “Schematics of the amino acid similarities four functional domains of members of the Secoviridae”. Please see the corrected Fig. 5 here.
These proteins are: on RNA1 (a), the putative protease cofactor or 1N terminal protein 1N(ProCo), the protease (Pro), and on RNA2 (b) the putative movement protein or 2N terminal protein 2N(MP), and the coat protein (CP). The analyzed proteins are those from five lineages of secovirids, the species Apple latent spherical virus (ALSV), Arabis mosaic virus (ArMV), Bean pod mottle virus (BPMV), Beet ringspot virus (BRSV), Black raspberry necrosis virus (BRNV), Blackcurrant reversion virus (BRV), Broad bean wilt virus-1 (BBWV1), Broad bean wilt virus-2 (BBWV2), Cherry rasp leaf virus (CRLV),Cowpea mosaic virus (CPMV), Cowpea severe mosaic virus (CPSMV), Cycas necrotic stunt virus (CNSV), Grapevine chrome mosaic (GCMV), Grapevine fanleaf virus (GFLV),Maize chlorotic dwarf virus (MCDV), Parsnip yellow fleck virus (PYFV), Radish mosaic virus (RaMV), Red clover mottle virus (RCMV), Rice tungro spherical virus (RTSV),Satsuma dwarf virus (SDV), Squash mosaic virus (SqMV), Strawberry mottle virus(SMoV), Strawberry latent ringspot virus (SLRSV), Tobacco ringspot virus (TRSV),Tomato marchitez virus (ToMarV) and Tomato ringspot virus (ToRSV), Tomato torrado virus (ToTV). In the lower light gray shaded hemisphere are the animal infecting families of the order Picornavirales, which excludes the picorna-like virus families Caliciviridae and Potyviridae. The outer broken black circle shows the clustering of related viruses in different secovirus lineages. Similarities were determined using the BLAST and PSI-BLAST algorithms; details of the PSI-BLAST are listed in table 4. Viruses depicted were selected based on the highest scoring sequence for each species (within the Secoviridae) or family (among the picorna-like viruses) with only one sequence hit being shown irrespective of the number identified by the program. Secovirids not included in primary analysis were only marked on the figure when they were the only representative that was a hit. For each taxon shown, Blast hits are depicted in favor of PSI-BLAST hits, PSI-BLAST hits only being shown in the absence of a Blast hit.
Reference
Citation: The PLOS ONE Staff (2015) Correction: An Evolutionary Analysis of the Secoviridae Family of Viruses. PLoS ONE 10(3): e0119267. https://doi.org/10.1371/journal.pone.0119267
Published: March 18, 2015
Copyright: © 2015 The PLOS ONE Staff. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited