Peer Review History
| Original SubmissionOctober 28, 2025 |
|---|
|
-->PONE-D-25-58360-->-->Chemical Composition, Seasonal Variability, and Source Identification of PM2.5 at an Urban Background Site in Medellín—Colombia-->-->PLOS ONE Dear Dr. Correa Ochoa, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process.-->--> -->-->Please submit your revised manuscript by Jan 10 2026 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:-->
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Dipesh Rupakheti Academic Editor PLOS ONE Journal Requirements: -->1. When submitting your revision, we need you to address these additional requirements.-->--> -->-->Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at -->-->https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and -->-->https://journals.plos.org/plosone/s/file?id=ba62/PLOSOne_formatting_sample_title_authors_affiliations.pdf-->--> -->-->2. We noticed you have some minor occurrence of overlapping text with the following previous publication(s), which needs to be addressed:-->--> -->-->KINETICS OF UO2 DISSOLUTION UNDER HIGHLY ALKALINE CONDITIONS: APPLICATION OF A THIN FILM CONTINUOUS-->-->FLOW-THROUGH REACTOR-https://upcommons.upc.edu/server/api/core/bitstreams/914956f5-d608-4414-a995-c1661105f8e2/content-->--> -->-->Characteristic Chemical Profile of Particulate Matter (PM2.5)—A Comparative Study Between Two Periods, Case Study in Medellín, Colombia- https://doi.org/10.3390/su17125380-->--> -->-->In your revision ensure you cite all your sources (including your own works), and quote or rephrase any duplicated text outside the methods section. Further consideration is dependent on these concerns being addressed.-->--> -->-->3. In your Methods section, please provide additional information regarding the permits you obtained for the work. Please ensure you have included the full name of the authority that approved the field site access and, if no permits were required, a brief statement explaining why.-->--> -->-->4. Thank you for stating the following financial disclosure: -->-->This research was funded by Ecopetrol (grant no. DHS 118) the Area Metropolitana del Valle de Aburrá (grant number 787) -->--> -->-->Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." -->-->If this statement is not correct you must amend it as needed. -->-->Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf.-->--> -->-->5. We note that your Data Availability Statement is currently as follows: All relevant data are within the manuscript and its Supporting Information files.-->--> -->-->Please confirm at this time whether or not your submission contains all raw data required to replicate the results of your study. Authors must share the “minimal data set” for their submission. PLOS defines the minimal data set to consist of the data required to replicate all study findings reported in the article, as well as related metadata and methods (https://journals.plos.org/plosone/s/data-availability#loc-minimal-data-set-definition).-->--> -->-->For example, authors should submit the following data:-->--> -->-->- The values behind the means, standard deviations and other measures reported;-->-->- The values used to build graphs;-->-->- The points extracted from images for analysis.-->--> -->-->Authors do not need to submit their entire data set if only a portion of the data was used in the reported study.-->--> -->-->If your submission does not contain these data, please either upload them as Supporting Information files or deposit them to a stable, public repository and provide us with the relevant URLs, DOIs, or accession numbers. For a list of recommended repositories, please see https://journals.plos.org/plosone/s/recommended-repositories.-->--> -->-->If there are ethical or legal restrictions on sharing a de-identified data set, please explain them in detail (e.g., data contain potentially sensitive information, data are owned by a third-party organization, etc.) and who has imposed them (e.g., an ethics committee). Please also provide contact information for a data access committee, ethics committee, or other institutional body to which data requests may be sent. If data are owned by a third party, please indicate how others may request data access.-->--> -->-->6. When completing the data availability statement of the submission form, you indicated that you will make your data available on acceptance. We strongly recommend all authors decide on a data sharing plan before acceptance, as the process can be lengthy and hold up publication timelines. Please note that, though access restrictions are acceptable now, your entire data will need to be made freely accessible if your manuscript is accepted for publication. This policy applies to all data except where public deposition would breach compliance with the protocol approved by your research ethics board. If you are unable to adhere to our open data policy, please kindly revise your statement to explain your reasoning and we will seek the editor's input on an exemption. Please be assured that, once you have provided your new statement, the assessment of your exemption will not hold up the peer review process.-->--> -->-->7. We note that Figure 1 in your submission contain map images which may be copyrighted. All PLOS content is published under the Creative Commons Attribution License (CC BY 4.0), which means that the manuscript, images, and Supporting Information files will be freely available online, and any third party is permitted to access, download, copy, distribute, and use these materials in any way, even commercially, with proper attribution. For these reasons, we cannot publish previously copyrighted maps or satellite images created using proprietary data, such as Google software (Google Maps, Street View, and Earth). For more information, see our copyright guidelines: http://journals.plos.org/plosone/s/licenses-and-copyright.-->--> -->-->We require you to either present written permission from the copyright holder to publish these figures specifically under the CC BY 4.0 license, or remove the figures from your submission:-->--> -->-->a. You may seek permission from the original copyright holder of Figure 1 to publish the content specifically under the CC BY 4.0 license. -->--> -->-->We recommend that you contact the original copyright holder with the Content Permission Form (http://journals.plos.org/plosone/s/file?id=7c09/content-permission-form.pdf) and the following text:-->-->“I request permission for the open-access journal PLOS ONE to publish XXX under the Creative Commons Attribution License (CCAL) CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/). Please be aware that this license allows unrestricted use and distribution, even commercially, by third parties. Please reply and provide explicit written permission to publish XXX under a CC BY license and complete the attached form.”-->--> -->-->Please upload the completed Content Permission Form or other proof of granted permissions as an "Other" file with your submission.-->--> -->-->In the figure caption of the copyrighted figure, please include the following text: “Reprinted from [ref] under a CC BY license, with permission from [name of publisher], original copyright [original copyright year].”-->--> -->-->b. If you are unable to obtain permission from the original copyright holder to publish these figures under the CC BY 4.0 license or if the copyright holder’s requirements are incompatible with the CC BY 4.0 license, please either i) remove the figure or ii) supply a replacement figure that complies with the CC BY 4.0 license. Please check copyright information on all replacement figures and update the figure caption with source information. If applicable, please specify in the figure caption text when a figure is similar but not identical to the original image and is therefore for illustrative purposes only.-->-->The following resources for replacing copyrighted map figures may be helpful:-->--> -->-->USGS National Map Viewer (public domain): http://viewer.nationalmap.gov/viewer/-->-->The Gateway to Astronaut Photography of Earth (public domain): http://eol.jsc.nasa.gov/sseop/clickmap/-->-->Maps at the CIA (public domain): https://www.cia.gov/library/publications/the-world-factbook/index.html and https://www.cia.gov/library/publications/cia-maps-publications/index.html-->-->NASA Earth Observatory (public domain): http://earthobservatory.nasa.gov/-->-->Landsat: http://landsat.visibleearth.nasa.gov/-->-->USGS EROS (Earth Resources Observatory and Science (EROS) Center) (public domain): http://eros.usgs.gov/#-->-->Natural Earth (public domain): http://www.naturalearthdata.com/-->--> -->-->8. Please upload a new copy of Figures 2a and 2b as the detail is not clear. Please follow the link for more information: https://journals.plos.org/plosone/s/figures-->--> -->-->9. Please remove your figures from within your manuscript file, leaving only the individual TIFF/EPS image files, uploaded separately. These will be automatically included in the reviewers’ PDF.-->--> -->-->10. If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. -->--> -->-->[Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions--> -->Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. --> Reviewer #1: Partly Reviewer #2: Partly Reviewer #3: Partly ********** -->2. Has the statistical analysis been performed appropriately and rigorously? --> Reviewer #1: N/A Reviewer #2: Yes Reviewer #3: Yes ********** -->3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.--> Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes ********** -->4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.--> Reviewer #1: No Reviewer #2: Yes Reviewer #3: Yes ********** -->5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)--> Reviewer #1: Some conclusions are not supported by the data. Eg, the traffic emissions contributions and their persistence. Also, it's difficult to check some conclusions as the months corresponding to PM2.5 concentrations are not mentioned in the figure. Statistical analysis: As the authors have not made their data analysis code available, it's not possible to check the statistical analysis. However, just reading the methods, the statistical analysis looks correct. Data availability - though the authors have mentioned that all the data are available without restriction, there is no reference to the raw data. There is no supporting information that contains the raw data or any online repository, eg., on GitHub. English: The language of the paper can be improved. Following is my feedback: Overall, the authors collected substantial data to identify sources of PM₂.₅. However, the manuscript would benefit from improvements in writing clarity and more detailed descriptions of study area and meteorological conditions for each monitoring day. I recommend using a consistent definition of PC2 throughout the paper. Describing it solely as “secondary aerosols” in certain sections may be misleading to readers. In the discussion, it is unclear which specific months were affected by the COVID-19 lockdown. The manuscript states that lockdown began in mid-March 2020, but also mentions “mixed effects” beforehand without specifying the months involved. Specific comments are provided below. Abstract Line 21: Change the capital “I” in “Industrial” to lowercase. Line 22: Add standard deviations to the reported mean PM₂.₅ concentrations. Lines 25- 27: Make it clear that traffic emissions here represents non-exhaust emissions. The conclusion is not well supported by the data. The so-called persistent sources, especially the non-exhaust traffic emissions only contribute <1% to total PM2.5 in all seasons (Table 6). Introduction Lines 84–86: Add references to support the statement about previous studies—what are the “few studies” referred to here? Methods Study Site Provide more detail on surrounding roads: Are they fully paved, partially paved, or unpaved? Clarify the sources of biomass burning in the region: – Is it dominated by seasonal crop residue burning? – Biomass use for cooking? – Wood burning for heating? Ensure consistent formatting of PM₂.₅ (use subscript for “2.5” throughout; e.g., lines 122, 127). Line 120: Add the number of samples collected in each season. Line 167: Correct to “analyzed”. Results / Discussion Line 187 (Table 2): Include standard deviations and medians for each variable measured in each season. Why does the Dry 1 period have the lowest average concentration? Please discuss. Figure 3: – Mark rainy days or indicate the average rainfall on monitoring days, if any. – Clarify the x-axis: include monitoring dates. – Explain the smoothing method used for PM₂.₅ (e.g., CMA) and state the window size. Line 255 (Table 5): In PC2, also include “mixed combustion”. Line 262: Correct “PC” to “OC”. Line 283: Table 6 is not cited in the text; please reference it. Line 306: The effect of rainfall is not visible in the data. Need to mark dates in the figure 3. Additionally, the impact of the lockdown is not apparent in the PM₂.₅ concentrations around mid-March 2020, mainly because the dates are not mentioned in the Figure 3. Reviewer #2: General Comments The manuscript titled ‘Chemical Composition, Seasonal Variability, and Source Identification of PM2.5 at an Urban Background Site in Medellín—Colombia’ explores the chemical composition and sources of PM in the city. The research is interesting and provides valuable insights. However, I think the manuscript needs improvements. Please check my comments below • Section: 2.3 what is the error/uncertainty in the quantification of metals and ions • Methodology section needs improvement in terms of what steps followed for quantification? What techniques used? What reagents used? This information will be helpful for readers to understand the research • In table.2 please provide the SD along with mean. Also include the mean and SD of all the quantified chemical species • PC5. Cl is also released from waste burning/mixed waste burning etc. How can you surely report it as Industrial emissions? • I recommend authors to collect satellite VIIRS derived fire data and plot for the region around the city for the study period to show how many fire spots occur? • It would be better if air mass back trajectories to the site is made and presented for the study period? May be concentration weighted trajectories? • Provide some data on number of construction buildings in the city per year. • Provide data of traffic vehicular count in the city Reviewer #3: The manuscript entitled “Chemical Composition, Seasonal Variability, and Source Identification of PM2.5 at an Urban Background Site in Medellín – Colombia” analysed a year-long concentration of PM2.5 and its sources in Colombia. Even though the manuscript is written in a proper manner, it requires some significant changes that need to be implemented before publication. So a major revision is required to improve the quality. The General and specific comments are attached in seperate sheet. ********** -->6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.--> Reviewer #1: No Reviewer #2: Yes: vignesh prabhu Reviewer #3: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] To ensure your figures meet our technical requirements, please review our figure guidelines: https://journals.plos.org/plosone/s/figures You may also use PLOS’s free figure tool, NAAS, to help you prepare publication quality figures: https://journals.plos.org/plosone/s/figures#loc-tools-for-figure-preparation. NAAS will assess whether your figures meet our technical requirements by comparing each figure against our figure specifications.
|
| Revision 1 |
|
Chemical Composition, Seasonal Variability, and Source Identification of PM2.5 at an Urban Background Site in Medellín—Colombia PONE-D-25-58360R1 Dear Dr. Correa Ochoa, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Dipesh Rupakheti Academic Editor PLOS One Additional Editor Comments (optional): Reviewers' comments: Reviewer's Responses to Questions -->Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.--> Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed Reviewer #3: All comments have been addressed ********** -->2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. --> Reviewer #1: Yes Reviewer #2: Partly Reviewer #3: Yes ********** -->3. Has the statistical analysis been performed appropriately and rigorously? --> Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** -->4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.--> Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** -->5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.--> Reviewer #1: Yes Reviewer #2: Yes Reviewer #3: Yes ********** -->6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)--> Reviewer #1: (No Response) Reviewer #2: (No Response) Reviewer #3: The authors had put a significant effort in correcting the manuscript. Now the manuscript can be considered for publication ********** -->7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.--> Reviewer #1: No Reviewer #2: Yes: vignesh prabhu Reviewer #3: No ********** |
| Formally Accepted |
|
PONE-D-25-58360R1 PLOS One Dear Dr. Correa-Ochoa, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS One. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Dipesh Rupakheti Academic Editor PLOS One |
Open letter on the publication of peer review reports
PLOS recognizes the benefits of transparency in the peer review process. Therefore, we enable the publication of all of the content of peer review and author responses alongside final, published articles. Reviewers remain anonymous, unless they choose to reveal their names.
We encourage other journals to join us in this initiative. We hope that our action inspires the community, including researchers, research funders, and research institutions, to recognize the benefits of published peer review reports for all parts of the research system.
Learn more at ASAPbio .