Peer Review History
| Original SubmissionDecember 1, 2025 |
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-->PONE-D-25-64287-->-->MODELING CELL MIGRATORY PERSISTENCE THROUGH TEMPORAL CORRELATIONS AND ANGULAR NOISE-->-->PLOS One Dear Dr. Ravasio, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript by Feb 20 2026 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:-->
If you would like to make changes to your financial disclosure, please include your updated statement in your cover letter. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. If applicable, we recommend that you deposit your laboratory protocols in protocols.io to enhance the reproducibility of your results. Protocols.io assigns your protocol its own identifier (DOI) so that it can be cited independently in the future. For instructions see: https://journals.plos.org/plosone/s/submission-guidelines#loc-laboratory-protocols. Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols. We look forward to receiving your revised manuscript. Kind regards, Haroldo V. Ribeiro Academic Editor PLOS One Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1.Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. We note that the grant information you provided in the ‘Funding Information’ and ‘Financial Disclosure’ sections do not match. When you resubmit, please ensure that you provide the correct grant numbers for the awards you received for your study in the ‘Funding Information’ section. 3. Thank you for stating the following financial disclosure: “This work was funded by ANID FONDECYT Regular 1210872, 1250073, 1221220; ANID FONDEQUIP EMQ210101, Núcleo Milenio SELFO NCN2024_068. AR and AM are grateful to PUC/VRI, PUC IIBM, PUC IMC, and the graduate program at IIBM for the seed funding and support.” Please state what role the funders took in the study. If the funders had no role, please state: "The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." If this statement is not correct you must amend it as needed. Please include this amended Role of Funder statement in your cover letter; we will change the online submission form on your behalf. 4. Please note that your Data Availability Statement is currently missing the repository name. If your manuscript is accepted for publication, you will be asked to provide these details on a very short timeline. We therefore suggest that you provide this information now, though we will not hold up the peer review process if you are unable. 5. Please include captions for your Supporting Information files at the end of your manuscript, and update any in-text citations to match accordingly. Please see our Supporting Information guidelines for more information: http://journals.plos.org/plosone/s/supporting-information. 6. If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. Additional Editor Comments: Please submit a revised version that responds to the reviewers by improving the literature context, clarifying the model's distinct contribution and scope, and providing quantitative evidence of anomalous diffusion (including MSD and related diagnostics). [Note: HTML markup is below. Please do not edit.] Reviewer's Responses to Questions -->Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. --> Reviewer #1: Yes Reviewer #2: Yes ********** -->2. Has the statistical analysis been performed appropriately and rigorously? --> Reviewer #1: Yes Reviewer #2: Yes ********** -->3. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.--> Reviewer #1: Yes Reviewer #2: Yes ********** -->4. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.--> Reviewer #1: Yes Reviewer #2: Yes ********** -->5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)--> Reviewer #1: The Authors use the FBM to describe cell migration by analysis of temporal correlations and angular reorientation. The presented material is interesting for the journal readers and worth considering. However, some points should be clarified. - Appropriate citations to the FBM are missing. FBM was formulated by Kolmogorov in 1940 and around 30 years later was rediscovered by Mandelbrot and Van Ness. This should be mentioned. - Many other papers on FBM and its applications are missing. There are many related papers on the topic by Metzler, Chechkin, Cherstvy, Sokolov, Vojta, Janušonis, Ślęzak, Krapf, etc. - What is different in the current model. Some comparison to the other FBM models should be discussed, advantages, disadvantages, etc. - Many sentences and statements are copied form the paper “On the role of fractional Brownian motion in models of chemotaxis and stochastic gradient ascent” by the same group of authors. - More physical explanation and justification of the use of FBM to describe cell migration is needed. There are many other models which share same/similar properties, such as fractional Langevin equation, generalized Langevin equation, continuous time random walk, etc. Why FBM is appropriate model for the current system? Have the authors verified that the trajectories, the probability density, the velocity autocorrelation function, the MSD are adequately explained by the FBM? - Subdiffusion and superdiffusion are mentioned in the paper, but never described. This should be explained in order to be clear for most of the readers, not just for the experts in the field. - The “memory effects” mentioned in the paper are not adequately explained. What is the reason of the memory effects, how they are incorporated in the model, etc? - Can you show the anomalous diffusive character of the process of interest by presenting results for the MSD (ensemble averaged/time averaged MSD)? Reviewer #2: The authors propose a model to describe cell mobility. This new model generalized the previous one by considering fractional Brownian motion with persistent, correlated noise instead of Gaussian noise. The model consists of two main stochastic equations: a Langevin-like equation to describe the motion (where there is friction and a correlated noise), and the equation that describes how the angle varies according to time, proportional to the square of the diffusion coefficient and the correlated noise (which replaces the Gaussian noise). The authors assume some 'postulates' such as the non-concern of the energetic states (where the energy comes from and how it is expended) and that, for biological reasons, the fractional Brownian motion is only persistent. The simulations and results are well-presented, clearly illustrating the interplay between these two mechanisms of anomalous diffusion. After the revision the suggestion is to accept the manuscript by considering minor revisions that would improve it: Revisions suggested: 1) In the introduction, models of the literature with the interplay of mechanisms of anomalous diffusion could be discussed by the authors. The complexity of living systems cannot (to date) be described by only one mechanism of anomalous diffusion. Over the last 20 years, several models have demonstrated that the interplay of mechanisms yields non-trivial behaviors. 2) It is not explicity if the models cause supperdifusion or subdiffusion. The authors mention the MSD in the introduction, but the analysis does not follow such an approach to description. It should be interesting to find that such an interplay of persistent, correlated noise can lead to subdiffusion, which is not a trivial case. Therefore, the MSD calculation could "talk" easier with the community of the anomalous diffusion research and enhance the findings presented here. 3) In the case of anomalous behaviors such subdiffusion, the author should research about the advantage of cells or living diffusion be subdiffusive in the case of targeting search. ********** -->6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.--> Reviewer #1: No Reviewer #2: Yes: Angel Akio Tateishi ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] To ensure your figures meet our technical requirements, please review our figure guidelines: https://journals.plos.org/plosone/s/figures You may also use PLOS’s free figure tool, NAAS, to help you prepare publication quality figures: https://journals.plos.org/plosone/s/figures#loc-tools-for-figure-preparation. NAAS will assess whether your figures meet our technical requirements by comparing each figure against our figure specifications. |
| Revision 1 |
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MODELING CELL MIGRATORY PERSISTENCE THROUGH TEMPORAL CORRELATIONS AND ANGULAR NOISE PONE-D-25-64287R1 Dear Dr. Ravasio, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Haroldo V. Ribeiro Academic Editor PLOS One Additional Editor Comments (optional): Both reviewers confirm that you have addressed their previous concerns and that the additions, particularly the mean-squared-displacement analysis, have substantially strengthened the manuscript. I am therefore pleased to recommend it for publication in PLOS ONE and congratulate you on this excellent work. Reviewers' comments: Reviewer's Responses to Questions -->Comments to the Author 1. If the authors have adequately addressed your comments raised in a previous round of review and you feel that this manuscript is now acceptable for publication, you may indicate that here to bypass the “Comments to the Author” section, enter your conflict of interest statement in the “Confidential to Editor” section, and submit your "Accept" recommendation.--> Reviewer #1: All comments have been addressed Reviewer #2: All comments have been addressed ********** -->2. Is the manuscript technically sound, and do the data support the conclusions? The manuscript must describe a technically sound piece of scientific research with data that supports the conclusions. Experiments must have been conducted rigorously, with appropriate controls, replication, and sample sizes. The conclusions must be drawn appropriately based on the data presented. --> Reviewer #1: Yes Reviewer #2: Yes ********** -->3. Has the statistical analysis been performed appropriately and rigorously? --> Reviewer #1: Yes Reviewer #2: Yes ********** -->4. Have the authors made all data underlying the findings in their manuscript fully available? The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.--> Reviewer #1: Yes Reviewer #2: Yes ********** -->5. Is the manuscript presented in an intelligible fashion and written in standard English? PLOS ONE does not copyedit accepted manuscripts, so the language in submitted articles must be clear, correct, and unambiguous. Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here.--> Reviewer #1: Yes Reviewer #2: Yes ********** -->6. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters)--> Reviewer #1: The manuscript has been improved and the manuscript can be accepted for publication. The added part with analysis of the mean squared displacement significantly support the findings in the manuscript. Reviewer #2: The authors have addressed the concerns and suggestions raised in my first evaluation. My review of the revised version was thus pragmatic in scope, focusing primarily on the issues previously identified and on whether they had been satisfactorily resolved. ********** -->7. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy.--> Reviewer #1: No Reviewer #2: No ********** |
| Formally Accepted |
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PONE-D-25-64287R1 PLOS One Dear Dr. Ravasio, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS One. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Haroldo V. Ribeiro Academic Editor PLOS One |
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