Peer Review History
| Original SubmissionNovember 12, 2025 |
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Dear Dr. Corthals, plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file.
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Additionally, PLOS ONE offers an option for publishing peer-reviewed Lab Protocol articles, which describe protocols hosted on protocols.io. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols.... We look forward to receiving your revised manuscript. Kind regards, Rachid Bouharroud Academic Editor PLOS One Journal Requirements: When submitting your revision, we need you to address these additional requirements. 1.Please ensure that your manuscript meets PLOS ONE's style requirements, including those for file naming. The PLOS ONE style templates can be found at https://journals.plos.org/plosone/s/file?id=wjVg/PLOSOne_formatting_sample_main_body.pdf and 2. Please note that funding information should not appear in any section or other areas of your manuscript. We will only publish funding information present in the Funding Statement section of the online submission form. 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If the reviewer comments include a recommendation to cite specific previously published works, please review and evaluate these publications to determine whether they are relevant and should be cited. There is no requirement to cite these works unless the editor has indicated otherwise. 8. Please review your reference list to ensure that it is complete and correct. If you have cited papers that have been retracted, please include the rationale for doing so in the manuscript text, or remove these references and replace them with relevant current references. Any changes to the reference list should be mentioned in the rebuttal letter that accompanies your revised manuscript. If you need to cite a retracted article, indicate the article’s retracted status in the References list and also include a citation and full reference for the retraction notice. [Note: HTML markup is below. Please do not edit.] Reviewers' comments: Reviewer's Responses to Questions Comments to the Author 1. Is the manuscript technically sound, and do the data support the conclusions? Reviewer #1: Yes Reviewer #2: Partly ********** 2. Has the statistical analysis been performed appropriately and rigorously? -->?> Reviewer #1: Yes Reviewer #2: Yes ********** 3. Have the authors made all data underlying the findings in their manuscript fully available??> The PLOS Data policy requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.requires authors to make all data underlying the findings described in their manuscript fully available without restriction, with rare exception (please refer to the Data Availability Statement in the manuscript PDF file). The data should be provided as part of the manuscript or its supporting information, or deposited to a public repository. For example, in addition to summary statistics, the data points behind means, medians and variance measures should be available. If there are restrictions on publicly sharing data—e.g. participant privacy or use of data from a third party—those must be specified.--> Reviewer #1: Yes Reviewer #2: Yes ********** 4. Is the manuscript presented in an intelligible fashion and written in standard English??> Reviewer #1: Yes Reviewer #2: Yes ********** Reviewer #1: The authors study uses single-nucleus transcriptomics and behavioral assays to identify conserved genes involved in humidity sensing in insects. By comparing Drosophila melanogaster and Ae. aegypti, the authors find a shared molecular signature in hygrosensory neurons across species separated by roughly 150 million years. Behavioral tests in flies show that three genes 5HT7, nubbin, and Kif19A are needed for normal humidity guided behavior. Overall, the work outlines a common molecular framework for how insects sense and respond to humidity. Some of the comments and suggestions are as below Are the behavioral defects specific to humidity sensing, or could they arise from broader sensory or locomotor issues? Were proper controls included to rule out pleiotropic effects of genes like nubbin and 5 HT7? It would help to briefly mention the type of humidity-guided behavior tested (e.g: preference, navigation, avoidance). Is the “hygrocool neuron” widely accepted as part of the humidity-sensing pathway, or is it better viewed as a temperature related component within the hygrosensillum? Consider acknowledging known nonIR pathways (GPCRs, mechanosensory channels, secnd messenger systems) to avoid an IRonly perspective. The description of mutant phenotypes could be clearer. If Ir21a mutants show normal humidity responses, what does this mean for redundancy or specialization among HRN subtypes? Phrases like “define these neurons” could be softened to “contribute to” unless causality is demonstrated. The sentence on lines 62–63 could be reworded for smoother flow. Introduce abbreviations (e.g: HRNs) earlier and keep them consistent. Gene name formatting should be uniform (e.g.: Ir40a, Ir68a). Use the correct mosquito abbreviation: Ae. aegypti. Materials and Methods How many nuclei/cells remained after QC per dataset? A summary table with dataset size, depth, and QC filters (UMIs, mitochondrial cutoff) is needed. With little or no Ir68a detected in either species, how was the moist-cell cluster confidently identified? Were other known markers used? Clarify how HRN identity was verified when canonical markers were weak. Bootstrap statistics are fine, but was multiple-testing correction applied? Minor comments Italicize gene names consistently. Fix “Ae. aegpyti” to Ae. aegypti. Break long paragraphs (89–100, 151–159) for clarity. “Transcriptome analysis” to “Single-nucleus transcriptomic analysis.” Results Clarify whether cluster 14 was treated as a combined HRN group or whether subclustering was done. Are there nonHRN cell types that express Ir40a in mosquitoes, or is expression HRN specific? State the number of flies tested per genotype and the variability across individuals. Re state whether behavioral deficits could reflect general locomotor or motivational issues. Conclusions about “functional conservation” should be softened because functional tests were only done in Drosophila. Emphasize transcriptional conservation for mosquitoes. minor commnets Keep gene formatting consistent (Kif19A vs. Kif19a). Add brief one-sentence summaries of figures. Avoid strong mechanistic claims without direct evidence. Fix spacing, capitalization, and typographical errors. Discussion Clarify that conservation across dipterans is shown at the transcriptional level; direct functional conservation is only tested in flies. The “regulatory code” of seven transcription factors should be presented as a proposed model, not a confirmed network. For fred and Dscam4, note that the suggested role is based on expression and known Dscam functions, not direct anatomical evidence. The analogy between iGluR modulators and IR-associated GPI-anchored proteins should be stated as a hypothesis without current biochemical proof. The serotonin link is interesting, frame it as a testable idea since changes in serotonin with humidity/desiccation have not been shown. Briefly clarify how insect sensory cilia compare to vertebrate cilia, since the discussion relies on this parallel. Minor comments Separate Ir21a temperature vs. humidity roles more clearly. Correct merged citations around lines 349–352. Remove repeated points between lines 336–342 and earlier. Keep gene name formatting consistent. Figures Fig 2: Use Ae. aegypti consistently. Add a note that two independent datasets were analyzed for reproducibility. Fig. 3: Reduce method details in the legend; move OrthoDB methods to the main Methods section. Add a simple concluding sentence about the conserved HRN signature. Fig. 4: Fix: “Hygrocool Cells (HC, chamber I/I)” → “chamber I/II.” Fix spacing in “Rh50+ (ammonium...)”. Keep gene formatting consistent; define all abbreviations at first use. Move extra method details out of legends where possible. Reviewer #2: PONE-D-25-60937_reviewer_comments: Overall comments: All terrestrial animals, including insects, need to be able to sense humidity in their environment to coordinate internal homeostasis necessary for survival. Sensing humidity involves specialized humidity receptor neurons (HRNs), which have been studied elsewhere with many key players identified, but the full picture remains elusive. In this current study, the authors compared humidity sensing neurons in two dipteran insects, the disease vector mosquito Aedes aegypti, and the model organism, Drosophila melanogaster. The authors identified 21 novel genes that appear to be shared in HRNs within these two organisms and may facilitate hygroreceptor functioning. Of these 21 candidates, the authors pursued further behavioural studies on three of these genes, using available mutant lines in Drosophila. However, these were mutant lines with ubiquitous deficiency - mutants affect the entire fly, not only in the HRNs where the authors demonstrated these genes are enriched. While the overall manuscript is well organized and written, the authors could strengthen this study by using additional mutant lines for the same target genes and also carry out specific knockdown/knockout in HRNs to confirm that the changes in humidity-responsive behaviour are indeed a result of expression of these three candidate genes (specifically 5-HT7, nubbin and Kif19A) in the HRNs. Otherwise, the authors can clarify that the data suggests generally the involvement of these genes in humidity responsive behaviours and not with certainty their expression in the HRNs. Also, since the authors carried out a comparative study on two dipteran insects, any extrapolation to additional insects beyond dipterans is highly speculative and should be removed. Specific and generally minor comments: Abstract L25-27: The broad claim here in the abstract that the current data suggests shared functional requirements for hygrosenation in insects is unjustified given the current study focuses on only two dipteran species, which are not representative of all insects. Infact, in all other sections of the manuscript, the authors are indeed more conservative with their conclusions indicating these genes likely play fundamental roles in hygrosensation in dipterans. Introduction L61: remove “and” Methods Are public data sets in flies based on female flies? Authors could clarify since they are comparing to female mosquito datasets. What about in extractions collected for de novo analysis in the current study? L104 and L108: no problem with how identity of neuronal and glial cells was assigned but authors should add appropriate references in support of these designations. L110: typo L124-135: These two small paragraphs are redundant and should be combined. Also, authors should provide references for IRs previously described in hygrosensory neurons. L161-164: Authors should clarify the function/purpose of each of the mutant strains. Additionally, are conclusions drawn on single mutant lines? Were lines backcrossed with controls? If not, shouldn’t they be? Results In results section (and elsewhere), all genes/transcripts should be written following standardized nomenclature, including italics to differentiate from proteins (see HUGO guidelines: https://pmc.ncbi.nlm.nih.gov/articles/PMC7494048/ or FlyBase: https://wiki.flybase.org/wiki/FlyBase:Nomenclature). L214: earlier in this section the authors indicated three clusters were identified expressing Ir93a, Ir40a and Ir21a that were also negative for olfactory neuron markers, but didn’t see any text describing details of the last one, cluster 32. L219: typo, italics L272-277: with each of the available (single) mutant lines used, how can the authors confirm that loss of each gene (lr21a, 5-HT7, and Kif19a; or hypomorpohic nub) specifically in hygrosensory structures explains the changes in humidity-driven behaviour? This conclusion would be strengthened by both independent mutants and cell specific knockdown/knockout in each of the different chamber cells. Otherwise, given the complexity in generating behaviour including input, integration and output, how can authors ascertain that their data shows a direct action involving only the hygrosensory neurons? Discussion L297 and onwards: see comments raised earlier regarding gene nomenclature. L314: typo in citation. L341-342: this sentence suffers from the same issue as in the abstract. Now the authors are extending their claims onto insects more broadly with no evidence beyond these two dipterans. The sentence should be revised given no evidence beyond these two species is provided in the current dataset, nor is there any reference to available evidence in the literature. The sentence is also missing a period. L397: this final sentence should, again, be more specific given the focus on two dipteran insects and not insects in general. L402-403: without the additional independent mutant lines and cell-specific knockdown/knockout, this statement is not specifically supported by the data since the mutants were global and not confined to the hygrosensory neurons. Thus, while expression of these candidates genes in hygrosensation were confirmed in the different neuronal clusters, their specific requirement in these neurons was not validated (which would support the statement provided by the authors in this section). ********** what does this mean?). If published, this will include your full peer review and any attached files.). If published, this will include your full peer review and any attached files.). If published, this will include your full peer review and any attached files.). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our For information about this choice, including consent withdrawal, please see our For information about this choice, including consent withdrawal, please see our For information about this choice, including consent withdrawal, please see our Privacy Policy..--> Reviewer #1: Yes: Vinaya ShettyVinaya ShettyVinaya ShettyVinaya Shetty Reviewer #2: No ********** [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". 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| Revision 1 |
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Conserved molecular signatures of hygrosensory neurons in two dipteran species PONE-D-25-60937R1 Dear Dr. Corthals, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice will be generated when your article is formally accepted. Please note, if your institution has a publishing partnership with PLOS and your article meets the relevant criteria, all or part of your publication costs will be covered. Please make sure your user information is up-to-date by logging into Editorial Manager at Editorial Manager® and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact and clicking the ‘Update My Information' link at the top of the page. For questions related to billing, please contact billing support.... If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Rachid Bouharroud Academic Editor PLOS One Additional Editor Comments (optional): Reviewers' comments: |
| Formally Accepted |
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PONE-D-25-60937R1 PLOS One Dear Dr. Corthals, I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS One. Congratulations! Your manuscript is now being handed over to our production team. At this stage, our production department will prepare your paper for publication. This includes ensuring the following: * All references, tables, and figures are properly cited * All relevant supporting information is included in the manuscript submission, * There are no issues that prevent the paper from being properly typeset You will receive further instructions from the production team, including instructions on how to review your proof when it is ready. Please keep in mind that we are working through a large volume of accepted articles, so please give us a few days to review your paper and let you know the next and final steps. Lastly, if your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. You will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. If we can help with anything else, please email us at customercare@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Rachid Bouharroud Academic Editor PLOS One |
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